Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8444 and 8445 are separated by 57 nucleotides8445 and 8446 are separated by 112 nucleotides8446 and 8447 are separated by 498 nucleotides8447 and 8448 are separated by 282 nucleotides mRNA_76: 8444 - K18164 NDUFAF7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7, at 182,247 to 184,330 8444 mRNA_77: 8445 - K13121 FRA10AC1 protein FRA10AC1, at 184,388 to 185,510 8445 mRNA_78: 8446 - HMMPfam-NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4)-PF07225, at 185,623 to 186,207 8446 mRNA_79: 8447 - K04906 KCNH3 potassium voltage-gated channel Eag-related subfamily H member 3, at 186,706 to 188,932 8447 mRNA_80: 8448 - K04911 KCNH8 potassium voltage-gated channel Eag-related subfamily H member 8, at 189,215 to 191,649 8448
Group Condition mRNA_76 mRNA_77 mRNA_78 mRNA_79 mRNA_80
8444 8445 8446 8447 8448
growth on oleic acid YNB Glucose N.D. N.D. N.D. -0.9 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. N.D. +0.0 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. N.D. -0.4 +0.0
growth on oleic acid YNB Oleic Acid N.D. N.D. N.D. -0.3 -0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. N.D. -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. N.D. -0.3 +0.0
auxotrophy Dropout Complete N.D. N.D. N.D. -0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. N.D. +0.3 -0.5
growth on ypd YPD N.D. N.D. N.D. -0.7 +0.6
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. N.D. -0.3 +0.2
auxotrophy YNB Glucose N.D. N.D. N.D. -0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. N.D. +0.1 -0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. N.D. -0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. N.D. -0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. N.D. +0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. N.D. +0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. N.D. +0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. N.D. +0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. N.D. +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. N.D. +0.2 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. N.D. +0.3 +0.1
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