Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8445 and 8446 are separated by 112 nucleotides8446 and 8447 are separated by 498 nucleotides8447 and 8448 are separated by 282 nucleotides8448 and 8449 are separated by 263 nucleotides mRNA_77: 8445 - K13121 FRA10AC1 protein FRA10AC1, at 184,388 to 185,510 8445 mRNA_78: 8446 - HMMPfam-NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4)-PF07225, at 185,623 to 186,207 8446 mRNA_79: 8447 - K04906 KCNH3 potassium voltage-gated channel Eag-related subfamily H member 3, at 186,706 to 188,932 8447 mRNA_80: 8448 - K04911 KCNH8 potassium voltage-gated channel Eag-related subfamily H member 8, at 189,215 to 191,649 8448 mRNA_81: 8449 - K12176 COPS2, CSN2, TRIP15 COP9 signalosome complex subunit 2, at 191,913 to 194,364 8449
Group Condition mRNA_77 mRNA_78 mRNA_79 mRNA_80 mRNA_81
8445 8446 8447 8448 8449
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.4 +0.0 -1.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.2 -0.1 -1.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.2 -0.1 -1.5
growth on oleic acid YNB Glucose N.D. N.D. -0.9 +0.1 -0.2
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.3 -0.0 -0.5
auxotrophy Dropout Complete N.D. N.D. -0.2 -0.0 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.1 +0.1 -0.7
auxotrophy YNB Glucose N.D. N.D. -0.2 +0.2 -0.5
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.3 -0.5 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.0 -0.8 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.3 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.1 -0.2 -0.3
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.2 +0.1 -0.2
growth on ypd YPD N.D. N.D. -0.7 +0.6 -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.3 +0.2 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.2 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.2 +0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.3 +0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.2 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.0 +0.1 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.2 -0.1 +0.7
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