Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8447 and 8448 are separated by 282 nucleotides
8448 and 8449 are separated by 263 nucleotides
8449 and 8450 are separated by 477 nucleotides
8450 and 8451 are separated by 48 nucleotides
mRNA_79: 8447 - K04906 KCNH3 potassium voltage-gated channel Eag-related subfamily H member 3, at 186,706 to 188,932
8447
mRNA_80: 8448 - K04911 KCNH8 potassium voltage-gated channel Eag-related subfamily H member 8, at 189,215 to 191,649
8448
mRNA_81: 8449 - K12176 COPS2, CSN2, TRIP15 COP9 signalosome complex subunit 2, at 191,913 to 194,364
8449
mRNA_82: 8450 - KOG0519 Sensory transduction histidine kinase, at 194,842 to 197,479
8450
mRNA_83: 8451 - Hypothetical Protein, at 197,528 to 201,315
8451
Group
Condition
mRNA
_79
mRNA
_80
mRNA
_81
mRNA
_82
mRNA
_83
8447
8448
8449
8450
8451
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
+0.0
-1.3
-0.2
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
-1.3
-0.0
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.1
-0.7
-0.1
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.1
-1.5
+0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
-0.8
+0.3
+0.1
-0.5
growth on oleic acid
YNB Glucose
-0.9
+0.1
-0.2
+0.1
+0.1
auxotrophy
Dropout Complete
-0.2
-0.0
-0.5
+0.1
-0.1
auxotrophy
YNB Glucose
-0.2
+0.2
-0.5
+0.0
-0.0
growth on ricinoleic acid
YNB Glucose
-0.2
+0.1
-0.2
+0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.0
-0.1
-0.0
-0.0
growth on oleic acid
YNB Oleic Acid
-0.3
-0.0
-0.5
+0.1
+0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.2
+0.0
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.2
-0.3
-0.0
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.5
-0.3
+0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.1
-0.1
+0.1
+0.1
growth on ypd
YPD
-0.7
+0.6
-0.0
+0.2
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.0
+0.2
+0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.3
+0.1
+0.0
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.0
+0.0
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.1
+0.7
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.1
+0.5
+0.1
+0.3
remove
mRNA_79
plot
remove
mRNA_80
plot
remove
mRNA_81
remove
mRNA_82
plot
remove
mRNA_83
plot