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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8449 and 8450 are separated by 477 nucleotides
8450 and 8451 are separated by 48 nucleotides
8451 and 8452 are separated by 507 nucleotides
8452 and 8453 are separated by 293 nucleotides
mRNA_81: 8449 - K12176 COPS2, CSN2, TRIP15 COP9 signalosome complex subunit 2, at 191,913 to 194,364
8449
mRNA_82: 8450 - KOG0519 Sensory transduction histidine kinase, at 194,842 to 197,479
8450
mRNA_83: 8451 - Hypothetical Protein, at 197,528 to 201,315
8451
mRNA_84: 8452 - K01522 FHIT bis(5'-adenosyl)-triphosphatase, at 201,823 to 202,716
8452
mRNA_85: 8453 - BLAST glutamine synthetase [Sanghuangporus baumii], at 203,010 to 204,516
8453
Group
Condition
mRNA
_81
mRNA
_82
mRNA
_83
mRNA
_84
mRNA
_85
8449
8450
8451
8452
8453
facs on lipid accumulation
Sorted No BODIPY Gate
-1.5
+0.1
+0.1
-1.8
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.1
-0.5
-2.7
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.7
-0.1
-0.5
+0.2
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-1.3
-0.0
-0.0
-0.3
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.3
-0.2
-0.4
+0.6
-0.0
growth on oleic acid
YNB Oleic Acid
-0.5
+0.1
+0.4
-1.0
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.2
-0.1
-1.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.0
+0.0
-0.7
+0.1
growth on oleic acid
YNB Glucose
-0.2
+0.1
+0.1
-0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.1
+0.3
-0.6
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.2
-0.0
-0.5
-0.0
auxotrophy
YNB Glucose
-0.5
+0.0
-0.0
+0.6
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.1
-0.2
+0.6
-0.4
auxotrophy
Dropout Complete
-0.5
+0.1
-0.1
+0.9
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
+0.1
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.7
-0.0
-0.0
-0.5
-0.0
growth on ypd
YPD
-0.0
+0.2
+0.2
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.0
-0.0
+0.5
-0.0
growth on ricinoleic acid
YNB Glucose
-0.2
+0.1
-0.3
+1.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.1
+0.1
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
+0.1
+0.3
-0.4
+0.1
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