Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 8452 and 8453 are separated by 293 nucleotides8453 and 8454 are separated by 301 nucleotides8454 and 8455 are separated by 339 nucleotides8455 and 8456 are separated by 465 nucleotides mRNA_84: 8452 - K01522 FHIT bis(5'-adenosyl)-triphosphatase, at 201,823 to 202,716 8452 mRNA_85: 8453 - BLAST glutamine synthetase [Sanghuangporus baumii], at 203,010 to 204,516 8453 mRNA_86: 8454 - K01452 E3.5.1.41 chitin deacetylase, at 204,818 to 206,685 8454 mRNA_87: 8455 - BLAST HAP1, N-terminal [Xanthophyllomyces dendrorhous], at 207,025 to 210,193 8455 mRNA_88: 8456 - K17361 ACOT9 acyl-coenzyme A thioesterase 9, at 210,659 to 212,272 8456
Group Condition mRNA_84 mRNA_85 mRNA_86 mRNA_87 mRNA_88
8452 8453 8454 8455 8456
ypd buoyancy 40 hrs No Buoyancy Separation -2.7 +0.1 +0.2 -0.7 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 +0.1 -0.4 -0.2 -0.8
facs on lipid accumulation Sorted No BODIPY Gate -1.8 +0.1 -0.1 +0.1 +0.0
growth on oleic acid YNB Oleic Acid -1.0 +0.0 -0.4 +0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.2 +0.1 -0.2 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.0 -0.0 +0.0 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.1 -0.3 -0.1 -0.4
growth on oleic acid YNB Glucose -0.2 -0.2 -0.4 -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.0 -0.0 -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 -0.2 -0.3 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.6 +0.2 -0.3 -0.2 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.5 -0.4 +0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.2 -0.0 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.0 -0.7 +0.3 -0.2
growth on ypd YPD -0.2 +0.1 -0.1 +0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.6 -0.4 -0.5 +0.4 -0.2
auxotrophy Dropout Complete +0.9 -0.4 -0.5 +0.2 -0.4
auxotrophy YNB Glucose +0.6 -0.2 -0.5 +0.3 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.5 -0.0 -0.2 +0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.0 -0.1 +0.4 +0.1
growth on ricinoleic acid YNB Glucose +1.1 -0.1 -0.2 +0.1 +0.1
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