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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8461 and 8462 are separated by 151 nucleotides
8462 and 8463 are separated by 905 nucleotides
8463 and 8464 are separated by 119 nucleotides
8464 and 8465 are separated by 195 nucleotides
mRNA_93: 8461 - ProSiteProfiles-BTB domain profile.-PS50097, at 219,909 to 221,427
8461
mRNA_94: 8462 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 221,579 to 223,787
8462
mRNA_95: 8463 - K14408 CSTF3, RNA14 cleavage stimulation factor subunit 3, at 224,693 to 228,325
8463
mRNA_96: 8464 - KOG4031 Vesicle coat protein clathrin, light chain, at 228,445 to 229,589
8464
mRNA_97: 8465 - KOG2234 Predicted UDP-galactose transporter, at 229,785 to 233,167
8465
Group
Condition
mRNA
_93
mRNA
_94
mRNA
_95
mRNA
_96
mRNA
_97
8461
8462
8463
8464
8465
auxotrophy
YNB Glucose
-0.6
+0.1
N.D.
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
+0.1
N.D.
N.D.
-0.0
auxotrophy
Dropout Complete
-0.4
-0.2
N.D.
N.D.
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-0.2
N.D.
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.3
N.D.
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.0
N.D.
N.D.
-0.2
growth on oleic acid
YNB Glucose
-0.2
+0.1
N.D.
N.D.
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.1
N.D.
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-0.0
N.D.
N.D.
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.0
N.D.
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.1
N.D.
N.D.
+0.2
growth on oleic acid
YNB Oleic Acid
+0.1
-0.1
N.D.
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.0
N.D.
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
-0.2
N.D.
N.D.
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
+0.7
N.D.
N.D.
-0.1
growth on ypd
YPD
-0.1
+0.3
N.D.
N.D.
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
+0.2
N.D.
N.D.
+0.0
growth on ricinoleic acid
YNB Glucose
+0.3
+0.4
N.D.
N.D.
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.3
N.D.
N.D.
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.5
+0.2
N.D.
N.D.
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.7
+0.5
N.D.
N.D.
-0.0
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