Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8462 and 8463 are separated by 905 nucleotides8463 and 8464 are separated by 119 nucleotides8464 and 8465 are separated by 195 nucleotides8465 and 8466 are separated by 706 nucleotides mRNA_94: 8462 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 221,579 to 223,787 8462 mRNA_95: 8463 - K14408 CSTF3, RNA14 cleavage stimulation factor subunit 3, at 224,693 to 228,325 8463 mRNA_96: 8464 - KOG4031 Vesicle coat protein clathrin, light chain, at 228,445 to 229,589 8464 mRNA_97: 8465 - KOG2234 Predicted UDP-galactose transporter, at 229,785 to 233,167 8465 mRNA_98: 8466 - Hypothetical Protein, at 233,874 to 234,659 8466
Group Condition mRNA_94 mRNA_95 mRNA_96 mRNA_97 mRNA_98
8462 8463 8464 8465 8466
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. N.D. -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. N.D. -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. N.D. +0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. N.D. -0.3 -0.3
auxotrophy Dropout Complete -0.2 N.D. N.D. -0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. N.D. -0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. N.D. -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. N.D. +0.1 -0.2
auxotrophy YNB Glucose +0.1 N.D. N.D. -0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. N.D. +0.2 -0.4
growth on oleic acid YNB Glucose +0.1 N.D. N.D. -0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. N.D. -0.0 -0.1
growth on oleic acid YNB Oleic Acid -0.1 N.D. N.D. +0.1 +0.0
growth on ricinoleic acid YNB Glucose +0.4 N.D. N.D. -0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. N.D. +0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 N.D. N.D. -0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. N.D. -0.0 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. N.D. +0.2 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 N.D. N.D. -0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. N.D. +0.0 +0.3
growth on ypd YPD +0.3 N.D. N.D. -0.0 +0.5
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