Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8463 and 8464 are separated by 119 nucleotides8464 and 8465 are separated by 195 nucleotides8465 and 8466 are separated by 706 nucleotides8466 and 8467 are separated by 934 nucleotides mRNA_95: 8463 - K14408 CSTF3, RNA14 cleavage stimulation factor subunit 3, at 224,693 to 228,325 8463 mRNA_96: 8464 - KOG4031 Vesicle coat protein clathrin, light chain, at 228,445 to 229,589 8464 mRNA_97: 8465 - KOG2234 Predicted UDP-galactose transporter, at 229,785 to 233,167 8465 mRNA_98: 8466 - Hypothetical Protein, at 233,874 to 234,659 8466 mRNA_99: 8467 - HMMPfam-Fungal cellulose binding domain-PF00734,HMMPfam-GlcNAc-PI de-N-acetylase-PF02585,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-Coagulation factors 5/8 type C domain (FA58C) profile.-PS50022,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF102588,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF57180, at 235,594 to 240,654 8467
Group Condition mRNA_95 mRNA_96 mRNA_97 mRNA_98 mRNA_99
8463 8464 8465 8466 8467
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.2 -0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.3 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.1 -0.3 -0.1
growth on oleic acid YNB Glucose N.D. N.D. -0.3 +0.2 -0.3
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.3 -0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.0 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.0 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.2 -0.4 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.1 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.1 -0.3 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.1 -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.1 -0.4 +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.2 +0.1 +0.0
auxotrophy Dropout Complete N.D. N.D. -0.0 -0.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.1 -0.1 +0.2
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.1 +0.0 -0.0
auxotrophy YNB Glucose N.D. N.D. -0.2 +0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.0 +0.3 -0.1
growth on ypd YPD N.D. N.D. -0.0 +0.5 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.0 +0.3 +0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.2 +0.3 +0.2
remove
mRNA_95
plot
remove
mRNA_96
plot
remove
mRNA_97
remove
mRNA_98
plot
remove
mRNA_99
plot