Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8465 and 8466 are separated by 706 nucleotides8466 and 8467 are separated by 934 nucleotides8467 and 8468 are separated by 682 nucleotides8468 and 8469 are separated by 605 nucleotides mRNA_97: 8465 - KOG2234 Predicted UDP-galactose transporter, at 229,785 to 233,167 8465 mRNA_98: 8466 - Hypothetical Protein, at 233,874 to 234,659 8466 mRNA_99: 8467 - HMMPfam-Fungal cellulose binding domain-PF00734,HMMPfam-GlcNAc-PI de-N-acetylase-PF02585,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-Coagulation factors 5/8 type C domain (FA58C) profile.-PS50022,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF102588,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF57180, at 235,594 to 240,654 8467 mRNA_100: 8468 - K03686 dnaJ molecular chaperone DnaJ, at 241,337 to 243,142 8468 mRNA_101: 8469 - K18719 NUP82 nucleoporin NUP82, at 243,748 to 246,867 8469
Group Condition mRNA_97 mRNA_98 mRNA_99 mRNA_100 mRNA_101
8465 8466 8467 8468 8469
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.3 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.3 -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.3 -0.1 N.D. N.D.
growth on oleic acid YNB Glucose -0.3 +0.2 -0.3 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.3 -0.1 +0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.1 -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.1 -0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.4 -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.1 -0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.3 +0.0 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 -0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.4 +0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.1 +0.0 N.D. N.D.
auxotrophy Dropout Complete -0.0 -0.0 -0.0 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 +0.2 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.0 -0.0 N.D. N.D.
auxotrophy YNB Glucose -0.2 +0.1 +0.2 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.3 -0.1 N.D. N.D.
growth on ypd YPD -0.0 +0.5 -0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.3 +0.0 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.3 +0.2 N.D. N.D.
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