Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8469 and 8470 are separated by 663 nucleotides8470 and 8471 are separated by 121 nucleotides8471 and 8472 are separated by 363 nucleotides8472 and 8473 are separated by 15 nucleotides mRNA_101: 8469 - K18719 NUP82 nucleoporin NUP82, at 243,748 to 246,867 8469 mRNA_102: 8470 - HMMPfam-PQ loop repeat-PF04193,SMART-Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins.-SM00679, at 247,531 to 248,783 8470 mRNA_103: 8471 - Hypothetical Protein, at 248,905 to 249,863 8471 mRNA_104: 8472 - Hypothetical Protein, at 250,227 to 251,681 8472 mRNA_105: 8473 - K08504 BET1 blocked early in transport 1, at 251,697 to 252,245 8473
Group Condition mRNA_101 mRNA_102 mRNA_103 mRNA_104 mRNA_105
8469 8470 8471 8472 8473
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.5 -0.5 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.8 +0.4 -0.3 N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.3 -0.1 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.4 -0.3 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.4 +0.2 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.5 +0.3 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 -0.3 -0.0 N.D.
auxotrophy Dropout Complete N.D. -0.4 -0.3 +0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 -0.1 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 -0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 +0.6 -0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 +0.0 -0.1 N.D.
auxotrophy YNB Glucose N.D. -0.1 -0.2 +0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 +0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 +0.3 -0.3 N.D.
growth on ypd YPD N.D. +0.5 +0.0 -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 +0.5 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 +0.8 -0.2 N.D.
growth on oleic acid YNB Glucose N.D. +0.7 +0.0 -0.2 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.6 -0.0 +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 +0.7 +0.1 N.D.
remove
mRNA_101
plot
remove
mRNA_102
plot
remove
mRNA_103
remove
mRNA_104
plot
remove
mRNA_105
plot