Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8471 and 8472 are separated by 363 nucleotides8472 and 8473 are separated by 15 nucleotides8473 and 8474 are separated by 377 nucleotides8474 and 8475 are separated by 276 nucleotides mRNA_103: 8471 - Hypothetical Protein, at 248,905 to 249,863 8471 mRNA_104: 8472 - Hypothetical Protein, at 250,227 to 251,681 8472 mRNA_105: 8473 - K08504 BET1 blocked early in transport 1, at 251,697 to 252,245 8473 mRNA_106: 8474 - K15201 GTP3C3, TFC4 general transcription factor 3C polypeptide 3 (transcription factor C subunit 4), at 252,623 to 256,756 8474 mRNA_107: 8475 - K08592 SENP1 sentrin-specific protease 1, at 257,033 to 257,891 8475
Group Condition mRNA_103 mRNA_104 mRNA_105 mRNA_106 mRNA_107
8471 8472 8473 8474 8475
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.1 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.1 -0.2 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.0 N.D. N.D. N.D.
growth on ypd YPD +0.0 -0.3 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.0 N.D. N.D. N.D.
growth on oleic acid YNB Glucose +0.0 -0.2 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.2 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.1 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.2 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.0 +0.0 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.3 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.3 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.2 N.D. N.D. N.D.
auxotrophy Dropout Complete -0.3 +0.4 N.D. N.D. N.D.
auxotrophy YNB Glucose -0.2 +0.3 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 -0.4 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.5 -0.0 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 -0.2 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.7 +0.1 N.D. N.D. N.D.
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