Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8474 and 8475 are separated by 276 nucleotides
8475 and 8476 are separated by 438 nucleotides
8476 and 8477 are separated by 108 nucleotides
8477 and 8478 are separated by 267 nucleotides
mRNA_106: 8474 - K15201 GTP3C3, TFC4 general transcription factor 3C polypeptide 3 (transcription factor C subunit 4), at 252,623 to 256,756
8474
mRNA_107: 8475 - K08592 SENP1 sentrin-specific protease 1, at 257,033 to 257,891
8475
mRNA_108: 8476 - Hypothetical Protein, at 258,330 to 258,956
8476
mRNA_109: 8477 - Hypothetical Protein, at 259,065 to 259,869
8477
mRNA_110: 8478 - KOG3399 Predicted Yippee-type zinc-binding protein, at 260,137 to 260,817
8478
Group
Condition
mRNA
_106
mRNA
_107
mRNA
_108
mRNA
_109
mRNA
_110
8474
8475
8476
8477
8478
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
N.D.
-0.6
-1.8
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
N.D.
+0.5
-1.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
-0.9
+0.4
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
-0.6
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
N.D.
+0.7
-0.9
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
N.D.
+0.4
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
N.D.
+1.5
-1.4
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
+1.0
-0.3
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
N.D.
+0.5
+0.4
auxotrophy
YNB Glucose
N.D.
N.D.
N.D.
+1.3
-0.3
growth on ypd
YPD
N.D.
N.D.
N.D.
+1.0
+0.0
growth on oleic acid
YNB Glucose
N.D.
N.D.
N.D.
+0.9
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
+1.2
-0.1
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
N.D.
+1.4
-0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
N.D.
+1.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
+1.5
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
N.D.
+1.7
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
N.D.
+1.4
+0.4
auxotrophy
Dropout Complete
N.D.
N.D.
N.D.
+2.0
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
N.D.
+1.8
+0.6
remove
mRNA_106
plot
remove
mRNA_107
plot
remove
mRNA_108
remove
mRNA_109
plot
remove
mRNA_110
plot