Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8476 and 8477 are separated by 108 nucleotides8477 and 8478 are separated by 267 nucleotides8478 and 8479 are separated by 112 nucleotides8479 and 8480 are separated by 396 nucleotides mRNA_108: 8476 - Hypothetical Protein, at 258,330 to 258,956 8476 mRNA_109: 8477 - Hypothetical Protein, at 259,065 to 259,869 8477 mRNA_110: 8478 - KOG3399 Predicted Yippee-type zinc-binding protein, at 260,137 to 260,817 8478 mRNA_111: 8479 - KOG0254 Predicted transporter (major facilitator superfamily), at 260,930 to 263,760 8479 mRNA_112: 8480 - K10899 RECQL ATP-dependent DNA helicase Q1, at 264,157 to 266,973 8480
Group Condition mRNA_108 mRNA_109 mRNA_110 mRNA_111 mRNA_112
8476 8477 8478 8479 8480
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.6 -1.8 -0.0 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.9 +0.4 -0.8 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.5 -1.1 +0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.6 +0.3 +0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.7 -0.9 -0.0 +0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 +0.2 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +1.5 -1.4 +0.6 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +1.1 +0.2 -0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. +0.4 -0.3 +0.9 -0.1
growth on oleic acid YNB Glucose N.D. +0.9 +0.2 +0.2 -0.1
auxotrophy YNB Glucose N.D. +1.3 -0.3 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +1.0 -0.3 +0.5 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +1.7 +0.0 -0.1 -0.3
growth on oleic acid YNB Oleic Acid N.D. +1.4 -0.2 +0.2 -0.1
growth on ricinoleic acid YNB Glucose N.D. +0.5 +0.4 +0.6 -0.0
growth on ypd YPD N.D. +1.0 +0.0 +0.6 -0.2
auxotrophy Dropout Complete N.D. +2.0 +0.0 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +1.2 -0.1 +0.6 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +1.5 +0.1 +0.1 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +1.4 +0.4 +0.7 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +1.8 +0.6 -0.1 +0.4
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