Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8476 and 8477 are separated by 108 nucleotides
8477 and 8478 are separated by 267 nucleotides
8478 and 8479 are separated by 112 nucleotides
8479 and 8480 are separated by 396 nucleotides
mRNA_108: 8476 - Hypothetical Protein, at 258,330 to 258,956
8476
mRNA_109: 8477 - Hypothetical Protein, at 259,065 to 259,869
8477
mRNA_110: 8478 - KOG3399 Predicted Yippee-type zinc-binding protein, at 260,137 to 260,817
8478
mRNA_111: 8479 - KOG0254 Predicted transporter (major facilitator superfamily), at 260,930 to 263,760
8479
mRNA_112: 8480 - K10899 RECQL ATP-dependent DNA helicase Q1, at 264,157 to 266,973
8480
Group
Condition
mRNA
_108
mRNA
_109
mRNA
_110
mRNA
_111
mRNA
_112
8476
8477
8478
8479
8480
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.6
-1.8
-0.0
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.9
+0.4
-0.8
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.5
-1.1
+0.4
-0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.6
+0.3
+0.1
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.7
-0.9
-0.0
+0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.2
+0.2
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+1.5
-1.4
+0.6
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+1.1
+0.2
-0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.4
-0.3
+0.9
-0.1
growth on oleic acid
YNB Glucose
N.D.
+0.9
+0.2
+0.2
-0.1
auxotrophy
YNB Glucose
N.D.
+1.3
-0.3
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+1.0
-0.3
+0.5
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+1.7
+0.0
-0.1
-0.3
growth on oleic acid
YNB Oleic Acid
N.D.
+1.4
-0.2
+0.2
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.5
+0.4
+0.6
-0.0
growth on ypd
YPD
N.D.
+1.0
+0.0
+0.6
-0.2
auxotrophy
Dropout Complete
N.D.
+2.0
+0.0
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+1.2
-0.1
+0.6
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+1.5
+0.1
+0.1
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+1.4
+0.4
+0.7
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+1.8
+0.6
-0.1
+0.4
remove
mRNA_108
plot
remove
mRNA_109
plot
remove
mRNA_110
remove
mRNA_111
plot
remove
mRNA_112
plot