Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8477 and 8478 are separated by 267 nucleotides8478 and 8479 are separated by 112 nucleotides8479 and 8480 are separated by 396 nucleotides8480 and 8481 are separated by 114 nucleotides mRNA_109: 8477 - Hypothetical Protein, at 259,065 to 259,869 8477 mRNA_110: 8478 - KOG3399 Predicted Yippee-type zinc-binding protein, at 260,137 to 260,817 8478 mRNA_111: 8479 - KOG0254 Predicted transporter (major facilitator superfamily), at 260,930 to 263,760 8479 mRNA_112: 8480 - K10899 RECQL ATP-dependent DNA helicase Q1, at 264,157 to 266,973 8480 mRNA_113: 8481 - KOG0209 P-type ATPase, at 267,088 to 267,405 8481
Group Condition mRNA_109 mRNA_110 mRNA_111 mRNA_112 mRNA_113
8477 8478 8479 8480 8481
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -1.8 -0.0 +0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 +0.4 -0.8 +0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.6 +0.3 +0.1 -0.0 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -1.1 +0.4 -0.3 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.3 +0.9 -0.1 -0.7
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.2 -0.1 -0.0 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.7 -0.9 -0.0 +0.3 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.5 -1.4 +0.6 +0.1 -0.3
growth on ypd YPD +1.0 +0.0 +0.6 -0.2 -0.4
growth on oleic acid YNB Glucose +0.9 +0.2 +0.2 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +1.2 -0.1 +0.6 -0.1 -0.3
auxotrophy YNB Glucose +1.3 -0.3 +0.3 -0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine +1.1 +0.2 -0.1 -0.3 +0.6
growth on ricinoleic acid YNB Glucose +0.5 +0.4 +0.6 -0.0 +0.1
growth on oleic acid YNB Oleic Acid +1.4 -0.2 +0.2 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.0 -0.3 +0.5 +0.1 +0.7
auxotrophy YNB Glucose 75mM Arginine +1.7 +0.0 -0.1 -0.3 +0.7
auxotrophy Dropout Complete +2.0 +0.0 -0.3 -0.1 +1.0
growth on ricinoleic acid YNB Methylricinoleic Acid +1.4 +0.4 +0.7 +0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +1.8 +0.6 -0.1 +0.4 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.5 +0.1 +0.1 +0.0 +1.0
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