Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8478 and 8479 are separated by 112 nucleotides8479 and 8480 are separated by 396 nucleotides8480 and 8481 are separated by 114 nucleotides8481 and 8482 are separated by 348 nucleotides mRNA_110: 8478 - KOG3399 Predicted Yippee-type zinc-binding protein, at 260,137 to 260,817 8478 mRNA_111: 8479 - KOG0254 Predicted transporter (major facilitator superfamily), at 260,930 to 263,760 8479 mRNA_112: 8480 - K10899 RECQL ATP-dependent DNA helicase Q1, at 264,157 to 266,973 8480 mRNA_113: 8481 - KOG0209 P-type ATPase, at 267,088 to 267,405 8481 mRNA_114: 8482 - K10862 TDP1 tyrosyl-DNA phosphodiesterase 1, at 267,754 to 270,066 8482
Group Condition mRNA_110 mRNA_111 mRNA_112 mRNA_113 mRNA_114
8478 8479 8480 8481 8482
facs on lipid accumulation Sorted High BODIPY Gate -1.8 -0.0 +0.3 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.4 +0.6 +0.1 -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 +0.4 -0.3 +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.9 -0.0 +0.3 +0.4 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.8 +0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.6 -0.1 -0.3 -0.2
auxotrophy YNB Glucose -0.3 +0.3 -0.1 +0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.9 -0.1 -0.7 +0.3
growth on ypd YPD +0.0 +0.6 -0.2 -0.4 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.1 -0.0 -0.4 +0.3
growth on oleic acid YNB Glucose +0.2 +0.2 -0.1 +0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 -0.0 +0.0 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.1 -0.3 +0.7 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.1 -0.3 +0.6 +0.0
growth on oleic acid YNB Oleic Acid -0.2 +0.2 -0.1 +0.4 +0.2
auxotrophy Dropout Complete +0.0 -0.3 -0.1 +1.0 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.7 +0.0 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.5 +0.1 +0.7 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.1 +0.4 -0.0 +0.1
growth on ricinoleic acid YNB Glucose +0.4 +0.6 -0.0 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.1 +0.0 +1.0 -0.1
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