Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8479 and 8480 are separated by 396 nucleotides8480 and 8481 are separated by 114 nucleotides8481 and 8482 are separated by 348 nucleotides8482 and 8483 are separated by 328 nucleotides mRNA_111: 8479 - KOG0254 Predicted transporter (major facilitator superfamily), at 260,930 to 263,760 8479 mRNA_112: 8480 - K10899 RECQL ATP-dependent DNA helicase Q1, at 264,157 to 266,973 8480 mRNA_113: 8481 - KOG0209 P-type ATPase, at 267,088 to 267,405 8481 mRNA_114: 8482 - K10862 TDP1 tyrosyl-DNA phosphodiesterase 1, at 267,754 to 270,066 8482 mRNA_115: 8483 - K14950 ATP13A1 cation-transporting ATPase 13A1, at 270,395 to 274,744 8483
Group Condition mRNA_111 mRNA_112 mRNA_113 mRNA_114 mRNA_115
8479 8480 8481 8482 8483
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 +0.1 +0.1 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.3 -0.1 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 -0.4 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 -0.1 -0.3 -0.2 N.D.
growth on ypd YPD +0.6 -0.2 -0.4 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 +0.1 -0.3 -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 +0.0 +0.3 N.D.
growth on oleic acid YNB Glucose +0.2 -0.1 +0.0 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 +0.6 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.9 -0.1 -0.7 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 +0.7 +0.1 N.D.
auxotrophy YNB Glucose +0.3 -0.1 +0.2 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.4 -0.0 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.3 +0.2 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.3 +0.4 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.7 +0.0 +0.1 -0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.6 -0.0 +0.1 +0.0 N.D.
growth on oleic acid YNB Oleic Acid +0.2 -0.1 +0.4 +0.2 N.D.
auxotrophy Dropout Complete -0.3 -0.1 +1.0 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.0 +1.0 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.1 +0.7 +0.1 N.D.
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