Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8480 and 8481 are separated by 114 nucleotides8481 and 8482 are separated by 348 nucleotides8482 and 8483 are separated by 328 nucleotides8483 and 8484 are separated by 305 nucleotides mRNA_112: 8480 - K10899 RECQL ATP-dependent DNA helicase Q1, at 264,157 to 266,973 8480 mRNA_113: 8481 - KOG0209 P-type ATPase, at 267,088 to 267,405 8481 mRNA_114: 8482 - K10862 TDP1 tyrosyl-DNA phosphodiesterase 1, at 267,754 to 270,066 8482 mRNA_115: 8483 - K14950 ATP13A1 cation-transporting ATPase 13A1, at 270,395 to 274,744 8483 mRNA_116: 8484 - K06072 DOHH deoxyhypusine monooxygenase, at 275,050 to 276,428 8484
Group Condition mRNA_112 mRNA_113 mRNA_114 mRNA_115 mRNA_116
8480 8481 8482 8483 8484
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.3 -0.2 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.7 +0.3 N.D. N.D.
growth on ypd YPD -0.2 -0.4 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.3 -0.2 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.1 -0.2 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.4 +0.3 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.1 -0.3 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.2 +0.1 N.D. N.D.
growth on oleic acid YNB Glucose -0.1 +0.0 +0.1 N.D. N.D.
auxotrophy YNB Glucose -0.1 +0.2 +0.1 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.0 +0.1 +0.0 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.1 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.0 +0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.6 +0.0 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.0 +0.1 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.4 +0.2 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.4 -0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.7 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.7 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +1.0 -0.1 N.D. N.D.
auxotrophy Dropout Complete -0.1 +1.0 +0.2 N.D. N.D.
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