Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8482 and 8483 are separated by 328 nucleotides8483 and 8484 are separated by 305 nucleotides8484 and 8485 are separated by 555 nucleotides8485 and 8486 are separated by 336 nucleotides mRNA_114: 8482 - K10862 TDP1 tyrosyl-DNA phosphodiesterase 1, at 267,754 to 270,066 8482 mRNA_115: 8483 - K14950 ATP13A1 cation-transporting ATPase 13A1, at 270,395 to 274,744 8483 mRNA_116: 8484 - K06072 DOHH deoxyhypusine monooxygenase, at 275,050 to 276,428 8484 mRNA_117: 8485 - K14815 MRT4 mRNA turnover protein 4, at 276,984 to 278,095 8485 mRNA_118: 8486 - HMMPfam-Protein of unknown function (DUF1674)-PF07896, at 278,432 to 278,981 8486
Group Condition mRNA_114 mRNA_115 mRNA_116 mRNA_117 mRNA_118
8482 8483 8484 8485 8486
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. N.D. N.D. -1.4
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. N.D. N.D. -1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. N.D. N.D. -1.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. N.D. N.D. -1.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. N.D. N.D. -0.9
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. N.D. N.D. -0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. N.D. N.D. -0.4
growth on ricinoleic acid YNB Glucose +0.0 N.D. N.D. N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. N.D. N.D. +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. N.D. N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. N.D. N.D. -0.0
growth on oleic acid YNB Oleic Acid +0.2 N.D. N.D. N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. N.D. N.D. +0.3
growth on oleic acid YNB Glucose +0.1 N.D. N.D. N.D. +0.5
auxotrophy YNB Glucose +0.1 N.D. N.D. N.D. +1.2
growth on ypd YPD +0.1 N.D. N.D. N.D. +1.3
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. N.D. N.D. +1.5
auxotrophy Dropout Complete +0.2 N.D. N.D. N.D. +1.5
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. N.D. N.D. +1.8
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