Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8491 and 8492 are separated by 128 nucleotides8492 and 8493 are separated by 364 nucleotides8493 and 8494 are separated by 203 nucleotides8494 and 8495 are separated by 2909 nucleotides mRNA_123: 8491 - Hypothetical Protein, at 297,739 to 298,245 8491 mRNA_124: 8492 - HMMPfam-Trehalose utilisation-PF06283,SUPERFAMILY--SSF52317, at 298,374 to 299,465 8492 mRNA_125: 8493 - HMMPfam-Alpha/beta hydrolase family-PF12695,SUPERFAMILY--SSF53474, at 299,830 to 300,571 8493 mRNA_126: 8494 - Hypothetical Protein, at 300,775 to 301,342 8494 mRNA_127: 8495 - K11229 BCK1 mitogen-activated protein kinase kinase kinase, at 304,252 to 307,207 8495
Group Condition mRNA_123 mRNA_124 mRNA_125 mRNA_126 mRNA_127
8491 8492 8493 8494 8495
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.4 -5.0 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.3 -1.0 -0.6 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.5 -0.4 -0.8 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.1 -0.6 -0.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.2 -0.4 -0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 -0.7 -0.0 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.2 -0.7 +0.1 -0.2
growth on ricinoleic acid YNB Glucose -0.1 +0.3 -1.1 +0.2 +0.2
growth on oleic acid YNB Oleic Acid +0.1 -0.3 -0.3 -0.0 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 -0.7 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.1 +0.3 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 +0.2 -0.5 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.2 +0.0 +0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.0 +0.2 -0.0 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.1 +0.0 -0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.1 -0.1 +0.1 +0.0
auxotrophy Dropout Complete -0.2 +0.3 -0.1 +0.1 +0.4
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.2 +0.2 +0.3 -0.0
growth on oleic acid YNB Glucose -0.1 -0.3 +0.7 +0.3 -0.0
auxotrophy YNB Glucose +0.1 +0.4 +0.1 +0.2 +0.2
growth on ypd YPD +0.2 +0.2 +1.6 +0.6 -0.3
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