Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8497 and 8498 are separated by 90 nucleotides
8498 and 8499 are separated by 186 nucleotides
8499 and 8500 are separated by 287 nucleotides
8500 and 8501 are separated by 418 nucleotides
mRNA_129: 8497 - SUPERFAMILY--SSF56112, at 312,995 to 315,210
8497
mRNA_130: 8498 - BLAST 60S ribosomal protein L18-B [Termitomyces sp. J132], at 315,301 to 316,369
8498
mRNA_131: 8499 - K11092 SNRPA1 U2 small nuclear ribonucleoprotein A', at 316,556 to 317,725
8499
mRNA_132: 8500 - K16944 SEPT7, CDC3 septin 7, at 318,013 to 320,034
8500
mRNA_133: 8501 - Hypothetical Protein, at 320,453 to 321,837
8501
Group
Condition
mRNA
_129
mRNA
_130
mRNA
_131
mRNA
_132
mRNA
_133
8497
8498
8499
8500
8501
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
N.D.
-1.7
-1.8
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
N.D.
-1.3
-0.4
-0.0
growth on oleic acid
YNB Oleic Acid
+0.1
N.D.
-1.0
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
N.D.
-0.3
-0.3
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
N.D.
-0.5
-0.2
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
N.D.
-0.1
-0.6
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
N.D.
-0.2
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
N.D.
+0.3
-0.3
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
N.D.
-0.2
-0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
-0.3
-0.5
+0.4
growth on oleic acid
YNB Glucose
+0.3
N.D.
-0.6
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
N.D.
-1.6
+0.6
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
N.D.
+0.0
-0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
N.D.
+0.7
-0.6
+0.0
auxotrophy
YNB Glucose
-0.2
N.D.
-0.2
+0.1
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.3
N.D.
-0.2
+0.1
-0.2
auxotrophy
Dropout Complete
-0.1
N.D.
-0.1
+0.2
+0.2
growth on ricinoleic acid
YNB Glucose
-0.2
N.D.
+0.5
+0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
N.D.
-0.8
+1.0
+0.6
growth on ypd
YPD
+0.4
N.D.
+1.0
-0.3
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
N.D.
-0.3
+0.7
+0.3
remove
mRNA_129
plot
remove
mRNA_130
plot
remove
mRNA_131
remove
mRNA_132
plot
remove
mRNA_133
plot