Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8498 and 8499 are separated by 186 nucleotides
8499 and 8500 are separated by 287 nucleotides
8500 and 8501 are separated by 418 nucleotides
8501 and 8502 are separated by 323 nucleotides
mRNA_130: 8498 - BLAST 60S ribosomal protein L18-B [Termitomyces sp. J132], at 315,301 to 316,369
8498
mRNA_131: 8499 - K11092 SNRPA1 U2 small nuclear ribonucleoprotein A', at 316,556 to 317,725
8499
mRNA_132: 8500 - K16944 SEPT7, CDC3 septin 7, at 318,013 to 320,034
8500
mRNA_133: 8501 - Hypothetical Protein, at 320,453 to 321,837
8501
mRNA_134: 8502 - Hypothetical Protein, at 322,161 to 322,511
8502
Group
Condition
mRNA
_130
mRNA
_131
mRNA
_132
mRNA
_133
mRNA
_134
8498
8499
8500
8501
8502
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-1.7
-1.8
-0.3
-2.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.3
-0.3
-0.2
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-1.3
-0.4
-0.0
+0.5
growth on oleic acid
YNB Glucose
N.D.
-0.6
-0.1
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
N.D.
-1.0
+0.0
-0.1
+0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
-0.6
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.2
-0.1
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-1.6
+0.6
+0.2
+0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
-0.1
-0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.3
-0.5
+0.4
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.2
-0.1
-0.0
+0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.5
-0.2
+0.0
+0.5
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.2
+0.1
-0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.7
-0.6
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.3
-0.3
-0.2
+0.4
auxotrophy
YNB Glucose
N.D.
-0.2
+0.1
+0.2
+0.2
auxotrophy
Dropout Complete
N.D.
-0.1
+0.2
+0.2
+0.2
growth on ricinoleic acid
YNB Glucose
N.D.
+0.5
+0.1
-0.0
+0.4
growth on ypd
YPD
N.D.
+1.0
-0.3
+0.0
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.3
+0.7
+0.3
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.8
+1.0
+0.6
+0.5
remove
mRNA_130
plot
remove
mRNA_131
plot
remove
mRNA_132
remove
mRNA_133
plot
remove
mRNA_134
plot