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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8501 and 8502 are separated by 323 nucleotides
8502 and 8503 are separated by 602 nucleotides
8503 and 8504 are separated by 774 nucleotides
8504 and 8505 are separated by 528 nucleotides
mRNA_133: 8501 - Hypothetical Protein, at 320,453 to 321,837
8501
mRNA_134: 8502 - Hypothetical Protein, at 322,161 to 322,511
8502
mRNA_135: 8503 - HMMPfam-Protein kinase domain-PF00069,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 323,114 to 325,275
8503
mRNA_136: 8504 - HMMPfam-Aldose 1-epimerase-PF01263,SUPERFAMILY--SSF74650, at 326,050 to 327,675
8504
mRNA_137: 8505 - SUPERFAMILY--SSF53474, at 328,204 to 331,764
8505
Group
Condition
mRNA
_133
mRNA
_134
mRNA
_135
mRNA
_136
mRNA
_137
8501
8502
8503
8504
8505
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-2.1
-0.2
-0.2
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.5
-0.1
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
-0.5
+0.0
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.2
+0.0
-0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
-0.3
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.4
-0.6
+0.0
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.1
-0.2
+0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.4
+0.0
-0.0
+0.0
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.1
+0.1
+0.2
+0.3
auxotrophy
Dropout Complete
+0.2
+0.2
+0.1
+0.0
-0.1
growth on oleic acid
YNB Oleic Acid
-0.1
+0.3
-0.1
+0.3
+0.1
auxotrophy
YNB Glucose
+0.2
+0.2
-0.0
+0.2
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.5
+0.1
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
+0.5
-0.4
+0.3
+0.3
growth on ricinoleic acid
YNB Glucose
-0.0
+0.4
+0.5
+0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.1
+0.6
+0.1
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.1
+0.0
+0.2
+0.4
growth on ypd
YPD
+0.0
+0.3
+0.2
+0.1
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.2
+0.6
+0.0
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.3
+0.7
-0.0
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.6
+0.5
+0.2
+0.3
+0.3
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