Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8503 and 8504 are separated by 774 nucleotides8504 and 8505 are separated by 528 nucleotides8505 and 8506 are separated by 312 nucleotides8506 and 8507 are separated by 323 nucleotides mRNA_135: 8503 - HMMPfam-Protein kinase domain-PF00069,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 323,114 to 325,275 8503 mRNA_136: 8504 - HMMPfam-Aldose 1-epimerase-PF01263,SUPERFAMILY--SSF74650, at 326,050 to 327,675 8504 mRNA_137: 8505 - SUPERFAMILY--SSF53474, at 328,204 to 331,764 8505 mRNA_138: 8506 - KOG4473 Uncharacterized membrane protein, at 332,077 to 333,617 8506 mRNA_139: 8507 - K14538 NUG1, GNL3 nuclear GTP-binding protein, at 333,941 to 336,511 8507
Group Condition mRNA_135 mRNA_136 mRNA_137 mRNA_138 mRNA_139
8503 8504 8505 8506 8507
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.2 +0.4 -1.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.0 +0.2 -0.9 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.0 -0.2 -0.7 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.1 -0.2 -0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 +0.0 +0.3 -1.7 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 -0.0 -0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 -0.0 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 +0.0 +0.2 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 -0.0 -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 +0.2 +0.2 N.D.
auxotrophy Dropout Complete +0.1 +0.0 -0.1 -0.0 N.D.
auxotrophy YNB Glucose -0.0 +0.2 -0.0 -0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.3 +0.1 -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.3 +0.3 -0.8 N.D.
growth on ricinoleic acid YNB Glucose +0.5 +0.1 -0.1 -0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 -0.0 +0.2 -0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.2 +0.4 -0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 +0.1 +0.4 -0.7 N.D.
growth on oleic acid YNB Glucose +0.1 +0.2 +0.3 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.3 +0.3 +1.2 N.D.
growth on ypd YPD +0.2 +0.1 +0.4 +1.1 N.D.
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