Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8504 and 8505 are separated by 528 nucleotides8505 and 8506 are separated by 312 nucleotides8506 and 8507 are separated by 323 nucleotides8507 and 8508 are separated by 133 nucleotides mRNA_136: 8504 - HMMPfam-Aldose 1-epimerase-PF01263,SUPERFAMILY--SSF74650, at 326,050 to 327,675 8504 mRNA_137: 8505 - SUPERFAMILY--SSF53474, at 328,204 to 331,764 8505 mRNA_138: 8506 - KOG4473 Uncharacterized membrane protein, at 332,077 to 333,617 8506 mRNA_139: 8507 - K14538 NUG1, GNL3 nuclear GTP-binding protein, at 333,941 to 336,511 8507 mRNA_140: 8508 - K14571 RIX7, NVL ribosome biogenesis ATPase, at 336,645 to 339,470 8508
Group Condition mRNA_136 mRNA_137 mRNA_138 mRNA_139 mRNA_140
8504 8505 8506 8507 8508
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.3 -1.7 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.4 -1.2 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.2 -0.7 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.2 -0.9 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.2 -0.5 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.4 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.2 -0.6 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0 -0.4 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.1 -0.1 -0.4 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.0 -0.3 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.3 -0.8 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.4 -0.7 N.D. N.D.
auxotrophy Dropout Complete +0.0 -0.1 -0.0 N.D. N.D.
auxotrophy YNB Glucose +0.2 -0.0 -0.2 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.3 +0.1 -0.3 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.2 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.2 +0.0 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.4 -0.3 N.D. N.D.
growth on oleic acid YNB Glucose +0.2 +0.3 -0.1 N.D. N.D.
growth on ypd YPD +0.1 +0.4 +1.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.3 +1.2 N.D. N.D.
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