Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8507 and 8508 are separated by 133 nucleotides8508 and 8509 are separated by 507 nucleotides8509 and 8510 are separated by 915 nucleotides8510 and 8511 are separated by 468 nucleotides mRNA_139: 8507 - K14538 NUG1, GNL3 nuclear GTP-binding protein, at 333,941 to 336,511 8507 mRNA_140: 8508 - K14571 RIX7, NVL ribosome biogenesis ATPase, at 336,645 to 339,470 8508 mRNA_141: 8509 - Hypothetical Protein, at 339,978 to 342,089 8509 mRNA_142: 8510 - HMMPfam-Protein of unknown function (DUF3712)-PF12505, at 343,005 to 355,699 8510 mRNA_143: 8511 - KOG4136 Predicted mitochondrial cholesterol transporter, at 356,168 to 357,922 8511
Group Condition mRNA_139 mRNA_140 mRNA_141 mRNA_142 mRNA_143
8507 8508 8509 8510 8511
growth on ypd YPD N.D. N.D. -0.7 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.0 -0.0 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.0 -0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.3 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.4 -0.0 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.5 -0.0 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.4 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.3 +0.1 +0.1
growth on oleic acid YNB Glucose N.D. N.D. -0.2 -0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.2 -0.0 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.2 -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.2 -0.0 -0.0
auxotrophy YNB Glucose N.D. N.D. +0.2 +0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.1 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.2 -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.1 +0.3 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.1 +0.1 +0.4
auxotrophy Dropout Complete N.D. N.D. +0.4 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.2 +0.0 +0.6
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.1 +0.1 +0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.4 +0.0 -0.0
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