Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8509 and 8510 are separated by 915 nucleotides8510 and 8511 are separated by 468 nucleotides8511 and 8512 are separated by 437 nucleotides8512 and 8513 are separated by 284 nucleotides mRNA_141: 8509 - Hypothetical Protein, at 339,978 to 342,089 8509 mRNA_142: 8510 - HMMPfam-Protein of unknown function (DUF3712)-PF12505, at 343,005 to 355,699 8510 mRNA_143: 8511 - KOG4136 Predicted mitochondrial cholesterol transporter, at 356,168 to 357,922 8511 mRNA_144: 8512 - K00698 CHS1 chitin synthase, at 358,360 to 365,387 8512 mRNA_145: 8513 - KOG3299 Uncharacterized conserved protein, at 365,672 to 367,146 8513
Group Condition mRNA_141 mRNA_142 mRNA_143 mRNA_144 mRNA_145
8509 8510 8511 8512 8513
growth on ypd YPD -0.7 +0.1 -0.2 -0.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.1 +0.4 -1.5 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 -0.5 -0.0 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.2 -0.3 -0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.1 -0.1 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.3 +0.0 -0.8 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.0 +0.2 -0.4 +0.5
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 +0.2 -0.0 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.1 -0.0 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.1 +0.1 +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.0 -0.0 -0.3 +0.2
growth on oleic acid YNB Glucose -0.2 -0.0 +0.1 +0.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.0 +0.3 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.1 +0.1 -0.5 +0.5
auxotrophy YNB Glucose +0.2 +0.0 -0.1 -0.2 +0.3
growth on oleic acid YNB Oleic Acid +0.1 +0.1 +0.2 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.1 +0.3 -0.1 +0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 +0.4 -0.5 +0.8
growth on ricinoleic acid YNB Glucose +0.4 +0.0 -0.0 -0.2 +0.4
auxotrophy Dropout Complete +0.4 -0.0 +0.1 -0.2 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.0 +0.6 +0.4 -0.0
remove
mRNA_141
plot
remove
mRNA_142
plot
remove
mRNA_143
remove
mRNA_144
plot
remove
mRNA_145
plot