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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8517 and 8518 are separated by 419 nucleotides
8518 and 8519 are separated by 956 nucleotides
8519 and 8520 are separated by 246 nucleotides
8520 and 8521 are separated by 2179 nucleotides
mRNA_149: 8517 - Hypothetical Protein, at 374,872 to 375,333
8517
mRNA_150: 8518 - HMMPfam-Beta-glucan synthesis-associated protein (SKN1)-PF03935,SUPERFAMILY--SSF49899, at 375,753 to 378,108
8518
mRNA_151: 8519 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 379,065 to 379,994
8519
mRNA_152: 8520 - BLAST Midasin [Pteropus alecto], at 380,241 to 381,290
8520
mRNA_153: 8521 - KOG4826 C-8,7 sterol isomerase, at 383,470 to 384,442
8521
Group
Condition
mRNA
_149
mRNA
_150
mRNA
_151
mRNA
_152
mRNA
_153
8517
8518
8519
8520
8521
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.1
-1.4
-0.0
-0.1
growth on ypd
YPD
-0.2
-0.1
-0.2
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.4
-0.5
-0.0
-0.1
-0.6
auxotrophy
Dropout Complete
+0.3
-0.5
-0.3
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.2
+0.0
+0.0
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.1
-0.6
+0.0
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.5
-0.3
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.0
-0.0
+0.0
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.3
+0.2
-0.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.4
+0.3
+0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.4
-0.0
+0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.1
-0.2
+0.1
-0.0
growth on oleic acid
YNB Glucose
+0.1
-0.3
+0.2
+0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.2
-0.0
+0.0
+0.1
+0.1
auxotrophy
YNB Glucose
+0.4
-0.1
+0.1
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
-0.2
-0.1
-0.0
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.4
+0.0
-0.2
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
-0.1
+0.1
+0.3
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.2
+0.6
+0.2
+0.3
growth on ricinoleic acid
YNB Glucose
+0.1
-0.1
+0.3
+0.2
+0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.9
+0.1
+0.7
+0.3
+0.5
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