Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8519 and 8520 are separated by 246 nucleotides
8520 and 8521 are separated by 2179 nucleotides
8521 and 8522 are separated by 531 nucleotides
8522 and 8523 are separated by 507 nucleotides
mRNA_151: 8519 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 379,065 to 379,994
8519
mRNA_152: 8520 - BLAST Midasin [Pteropus alecto], at 380,241 to 381,290
8520
mRNA_153: 8521 - KOG4826 C-8,7 sterol isomerase, at 383,470 to 384,442
8521
mRNA_154: 8522 - Hypothetical Protein, at 384,974 to 388,118
8522
mRNA_155: 8523 - K20069 NECAP1_2 adaptin ear-binding coat-associated protein 1/2, at 388,626 to 389,791
8523
Group
Condition
mRNA
_151
mRNA
_152
mRNA
_153
mRNA
_154
mRNA
_155
8519
8520
8521
8522
8523
ypd buoyancy
40 hrs No Buoyancy Separation
-1.4
-0.0
-0.1
-0.3
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
+0.0
+0.2
-0.3
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.1
-0.6
+0.3
-0.5
growth on ypd
YPD
-0.2
-0.2
-0.2
-0.1
+0.1
auxotrophy
Dropout Complete
-0.3
-0.0
-0.3
+0.3
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.0
-0.4
+0.3
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.0
-0.3
+0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.0
-0.0
-0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.1
-0.2
-0.1
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.1
-0.0
+0.2
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.2
+0.0
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
+0.3
+0.1
-0.3
growth on oleic acid
YNB Glucose
+0.2
+0.1
-0.1
+0.3
-0.5
auxotrophy
YNB Glucose
+0.1
+0.1
-0.2
+0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.1
+0.2
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.1
+0.2
+0.1
-0.0
growth on oleic acid
YNB Oleic Acid
+0.0
+0.1
+0.1
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.3
+0.1
+0.6
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.6
+0.2
+0.3
-0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.7
+0.3
+0.5
-0.7
-0.1
growth on ricinoleic acid
YNB Glucose
+0.3
+0.2
+0.6
+0.0
+0.2
remove
mRNA_151
plot
remove
mRNA_152
plot
remove
mRNA_153
remove
mRNA_154
plot
remove
mRNA_155
plot