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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8520 and 8521 are separated by 2179 nucleotides
8521 and 8522 are separated by 531 nucleotides
8522 and 8523 are separated by 507 nucleotides
8523 and 8524 are separated by 332 nucleotides
mRNA_152: 8520 - BLAST Midasin [Pteropus alecto], at 380,241 to 381,290
8520
mRNA_153: 8521 - KOG4826 C-8,7 sterol isomerase, at 383,470 to 384,442
8521
mRNA_154: 8522 - Hypothetical Protein, at 384,974 to 388,118
8522
mRNA_155: 8523 - K20069 NECAP1_2 adaptin ear-binding coat-associated protein 1/2, at 388,626 to 389,791
8523
mRNA_156: 8524 - Hypothetical Protein, at 390,124 to 390,698
8524
Group
Condition
mRNA
_152
mRNA
_153
mRNA
_154
mRNA
_155
mRNA
_156
8520
8521
8522
8523
8524
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.1
-0.3
-0.7
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.2
-0.1
-0.4
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
+0.2
-0.3
-0.5
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.6
+0.3
-0.5
+0.1
growth on oleic acid
YNB Glucose
+0.1
-0.1
+0.3
-0.5
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.3
+0.0
-0.1
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.0
-0.1
-0.2
+0.3
growth on ypd
YPD
-0.2
-0.2
-0.1
+0.1
+0.4
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.4
+0.3
-0.5
+0.7
auxotrophy
YNB Glucose
+0.1
-0.2
+0.3
-0.2
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.5
-0.7
-0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.0
+0.2
-0.3
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.2
+0.1
-0.1
-0.1
auxotrophy
Dropout Complete
-0.0
-0.3
+0.3
-0.3
+0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.3
-0.3
-0.0
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.0
-0.2
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.2
+0.1
-0.0
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.3
+0.1
-0.3
+0.7
growth on oleic acid
YNB Oleic Acid
+0.1
+0.1
+0.0
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.1
+0.6
-0.4
+0.3
growth on ricinoleic acid
YNB Glucose
+0.2
+0.6
+0.0
+0.2
+0.3
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