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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8524 and 8525 are separated by 679 nucleotides
8525 and 8526 are separated by 179 nucleotides
8526 and 8527 are separated by 922 nucleotides
8527 and 8528 are separated by 734 nucleotides
mRNA_156: 8524 - Hypothetical Protein, at 390,124 to 390,698
8524
mRNA_157: 8525 - KOG3066 Translin-associated protein X, at 391,378 to 392,552
8525
mRNA_158: 8526 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 392,732 to 393,571
8526
mRNA_159: 8527 - Hypothetical Protein, at 394,494 to 395,592
8527
mRNA_160: 8528 - K05349 bglX beta-glucosidase, at 396,327 to 398,883
8528
Group
Condition
mRNA
_156
mRNA
_157
mRNA
_158
mRNA
_159
mRNA
_160
8524
8525
8526
8527
8528
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.7
-0.8
+0.2
-0.1
growth on oleic acid
YNB Glucose
+0.1
-0.1
-0.4
-0.1
-0.4
auxotrophy
Dropout Complete
+0.6
-0.4
-0.2
-0.1
-0.5
auxotrophy
YNB Glucose
+0.2
+0.1
-0.6
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.7
+0.0
-0.8
-0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.4
-0.1
+0.0
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.3
+0.0
-0.2
-0.0
-0.3
growth on ricinoleic acid
YNB Glucose
+0.3
+0.1
-0.3
+0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.5
-0.3
-0.0
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.4
+0.4
-0.5
+0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.1
+0.0
-0.1
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.5
+0.0
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.6
+0.9
+0.1
+0.4
growth on oleic acid
YNB Oleic Acid
+0.4
+0.4
-0.1
-0.1
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.1
+0.3
+0.2
+0.2
growth on ypd
YPD
+0.4
-0.2
+0.2
+0.3
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.1
+0.6
+0.3
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+1.6
-0.9
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+1.3
-0.6
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.7
+0.9
-0.1
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
+1.9
-0.2
+0.2
+0.2
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