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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8529 and 8530 are separated by 512 nucleotides
8530 and 8531 are separated by 259 nucleotides
8531 and 8532 are separated by 299 nucleotides
8532 and 8533 are separated by 411 nucleotides
mRNA_161: 8529 - KOG1727 Microtubule-binding protein (translationally controlled tumor protein), at 399,773 to 400,854
8529
mRNA_162: 8530 - BLAST NADH dehydrogenase [ubiquinone] 1 alpha subcomplex su..., at 401,367 to 403,016
8530
mRNA_163: 8531 - Hypothetical Protein, at 403,276 to 404,295
8531
mRNA_164: 8532 - Hypothetical Protein, at 404,595 to 407,143
8532
mRNA_165: 8533 - K12602 WDR61, REC14, SKI8 WD repeat-containing protein 61, at 407,555 to 409,013
8533
Group
Condition
mRNA
_161
mRNA
_162
mRNA
_163
mRNA
_164
mRNA
_165
8529
8530
8531
8532
8533
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.7
-0.3
+0.0
-1.6
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.4
-0.4
-0.2
-0.5
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.0
-0.4
+0.1
-1.0
auxotrophy
Dropout Complete
N.D.
-0.3
+0.1
-0.0
-0.9
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.5
-0.2
-0.0
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.8
-0.9
-0.1
-0.9
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.2
-0.1
+0.0
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.9
+0.5
+0.1
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.3
+0.1
-0.0
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.2
+0.4
-0.2
-0.6
auxotrophy
YNB Glucose
N.D.
-0.2
-0.1
+0.1
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.4
-0.1
+0.0
-0.2
growth on oleic acid
YNB Glucose
N.D.
-0.1
+0.3
+0.2
-0.9
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.4
-0.0
+0.0
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.1
+0.4
-0.1
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.6
+0.1
+0.5
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
+0.3
-0.0
-0.0
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
+0.4
+0.2
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.4
+0.6
+0.0
-0.6
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.2
+0.4
-0.0
+0.4
growth on ypd
YPD
N.D.
+0.7
+0.5
-0.2
+0.4
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