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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8531 and 8532 are separated by 299 nucleotides
8532 and 8533 are separated by 411 nucleotides
8533 and 8534 are separated by 313 nucleotides
8534 and 8535 are separated by 543 nucleotides
mRNA_163: 8531 - Hypothetical Protein, at 403,276 to 404,295
8531
mRNA_164: 8532 - Hypothetical Protein, at 404,595 to 407,143
8532
mRNA_165: 8533 - K12602 WDR61, REC14, SKI8 WD repeat-containing protein 61, at 407,555 to 409,013
8533
mRNA_166: 8534 - K07936 RAN GTP-binding nuclear protein Ran, at 409,327 to 410,564
8534
mRNA_167: 8535 - KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins, at 411,108 to 413,532
8535
Group
Condition
mRNA
_163
mRNA
_164
mRNA
_165
mRNA
_166
mRNA
_167
8531
8532
8533
8534
8535
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
-0.1
-0.9
N.D.
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.0
-1.6
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.4
+0.1
-1.0
N.D.
-0.2
auxotrophy
Dropout Complete
+0.1
-0.0
-0.9
N.D.
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.2
-0.5
N.D.
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.0
-0.8
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.0
-0.4
N.D.
+0.1
auxotrophy
YNB Glucose
-0.1
+0.1
-0.5
N.D.
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
-0.2
-0.6
N.D.
+0.1
growth on oleic acid
YNB Glucose
+0.3
+0.2
-0.9
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.0
-0.2
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.0
-0.5
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
-0.1
-0.4
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
+0.1
-0.5
N.D.
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
+0.1
+0.5
N.D.
+0.1
growth on oleic acid
YNB Oleic Acid
+0.4
+0.2
-0.1
N.D.
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.0
+0.1
N.D.
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.0
-0.0
N.D.
+0.1
growth on ricinoleic acid
YNB Glucose
+0.6
+0.0
-0.6
N.D.
+0.3
growth on ypd
YPD
+0.5
-0.2
+0.4
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.4
-0.0
+0.4
N.D.
-0.0
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