Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8537 and 8538 are separated by 243 nucleotides8538 and 8539 are separated by 161 nucleotides8539 and 8540 are separated by 499 nucleotides8540 and 8541 are separated by 381 nucleotides mRNA_169: 8537 - K14306 NUP62, NSP1 nuclear pore complex protein Nup62, at 415,068 to 417,360 8537 mRNA_170: 8538 - K12179 COPS6, CSN6 COP9 signalosome complex subunit 6, at 417,604 to 419,070 8538 mRNA_171: 8539 - K03237 EIF2S1 translation initiation factor 2 subunit 1, at 419,232 to 420,600 8539 mRNA_172: 8540 - K14264 BNA3 kynurenine aminotransferase, at 421,100 to 422,861 8540 mRNA_173: 8541 - ProSiteProfiles-F-box domain profile.-PS50181, at 423,243 to 425,969 8541
Group Condition mRNA_169 mRNA_170 mRNA_171 mRNA_172 mRNA_173
8537 8538 8539 8540 8541
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -1.0 N.D. -0.3 +0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -1.0 N.D. -0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 N.D. -0.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. -1.3 N.D. +0.1 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -1.2 N.D. +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.5 N.D. -0.0 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.4 N.D. -0.1 -0.2
auxotrophy Dropout Complete N.D. -0.5 N.D. -0.4 +0.4
growth on ricinoleic acid YNB Glucose N.D. -0.5 N.D. -0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.5 N.D. -0.2 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 N.D. -0.5 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 N.D. -0.1 -0.1
auxotrophy YNB Glucose N.D. -0.4 N.D. -0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 N.D. -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.5 N.D. -0.1 +0.6
growth on oleic acid YNB Glucose N.D. +0.2 N.D. -0.0 +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.1 N.D. +0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.3 N.D. +0.2 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 N.D. +0.2 +0.2
growth on ypd YPD N.D. +0.1 N.D. +0.0 +0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.3 N.D. +0.2 +0.2
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