Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8539 and 8540 are separated by 499 nucleotides8540 and 8541 are separated by 381 nucleotides8541 and 8542 are separated by 456 nucleotides8542 and 8543 are separated by 677 nucleotides mRNA_171: 8539 - K03237 EIF2S1 translation initiation factor 2 subunit 1, at 419,232 to 420,600 8539 mRNA_172: 8540 - K14264 BNA3 kynurenine aminotransferase, at 421,100 to 422,861 8540 mRNA_173: 8541 - ProSiteProfiles-F-box domain profile.-PS50181, at 423,243 to 425,969 8541 mRNA_174: 8542 - HMMPfam-Glyoxal oxidase N-terminus-PF07250,HMMPfam-Domain of unknown function (DUF1929)-PF09118,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF81296, at 426,426 to 428,792 8542 mRNA_175: 8543 - KOG2533 Permease of the major facilitator superfamily, at 429,470 to 431,854 8543
Group Condition mRNA_171 mRNA_172 mRNA_173 mRNA_174 mRNA_175
8539 8540 8541 8542 8543
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 +0.2 -0.7 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 -0.4 -0.2 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 -0.2 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 -0.1 -0.0 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.0 -0.3 -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 +0.4 -0.0 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.5 +0.1 +0.2 -0.1
growth on oleic acid YNB Oleic Acid N.D. +0.2 +0.2 -0.3 -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 +0.2 -0.3 -0.2
growth on oleic acid YNB Glucose N.D. -0.0 +0.1 +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 +0.4 -0.1 -0.2
auxotrophy Dropout Complete N.D. -0.4 +0.4 +0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 +0.2 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 -0.1 +0.2 -0.0
growth on ricinoleic acid YNB Glucose N.D. -0.2 +0.1 +0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 +0.4 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 +0.0 -0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 +0.3 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 +0.6 +0.3 -0.3
growth on ypd YPD N.D. +0.0 +0.5 -0.5 +0.6
auxotrophy YNB Glucose N.D. -0.1 +0.4 +0.4 -0.1
remove
mRNA_171
plot
remove
mRNA_172
plot
remove
mRNA_173
remove
mRNA_174
plot
remove
mRNA_175
plot