Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8540 and 8541 are separated by 381 nucleotides8541 and 8542 are separated by 456 nucleotides8542 and 8543 are separated by 677 nucleotides8543 and 8544 are separated by 675 nucleotides mRNA_172: 8540 - K14264 BNA3 kynurenine aminotransferase, at 421,100 to 422,861 8540 mRNA_173: 8541 - ProSiteProfiles-F-box domain profile.-PS50181, at 423,243 to 425,969 8541 mRNA_174: 8542 - HMMPfam-Glyoxal oxidase N-terminus-PF07250,HMMPfam-Domain of unknown function (DUF1929)-PF09118,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF81296, at 426,426 to 428,792 8542 mRNA_175: 8543 - KOG2533 Permease of the major facilitator superfamily, at 429,470 to 431,854 8543 mRNA_176: 8544 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 432,530 to 433,945 8544
Group Condition mRNA_172 mRNA_173 mRNA_174 mRNA_175 mRNA_176
8540 8541 8542 8543 8544
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.4 -0.2 -0.3 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.1 +0.2 -0.1 -0.9
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.2 -0.7 -0.5 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.3 -0.1 -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.2 -0.4 -0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.4 -0.2 -0.1 -0.7
growth on oleic acid YNB Glucose -0.0 +0.1 +0.1 -0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.4 -0.0 -0.5 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 -0.0 -0.4 +0.4
growth on oleic acid YNB Oleic Acid +0.2 +0.2 -0.3 -0.3 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.2 -0.3 -0.2 +0.0
growth on ricinoleic acid YNB Glucose -0.2 +0.1 +0.2 -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.2 -0.4 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.1 +0.2 -0.0 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.0 -0.1 -0.0 +0.0
auxotrophy Dropout Complete -0.4 +0.4 +0.1 -0.2 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.3 +0.1 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.4 -0.1 -0.2 +0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.6 +0.3 -0.3 +0.3
growth on ypd YPD +0.0 +0.5 -0.5 +0.6 +0.3
auxotrophy YNB Glucose -0.1 +0.4 +0.4 -0.1 +0.6
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