Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8542 and 8543 are separated by 677 nucleotides8543 and 8544 are separated by 675 nucleotides8544 and 8545 are separated by 171 nucleotides8545 and 8546 are separated by 383 nucleotides mRNA_174: 8542 - HMMPfam-Glyoxal oxidase N-terminus-PF07250,HMMPfam-Domain of unknown function (DUF1929)-PF09118,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF81296, at 426,426 to 428,792 8542 mRNA_175: 8543 - KOG2533 Permease of the major facilitator superfamily, at 429,470 to 431,854 8543 mRNA_176: 8544 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 432,530 to 433,945 8544 mRNA_177: 8545 - KOG4096 Uncharacterized conserved protein, at 434,117 to 434,779 8545 mRNA_178: 8546 - K00974 cca tRNA nucleotidyltransferase (CCA-adding enzyme), at 435,163 to 437,748 8546
Group Condition mRNA_174 mRNA_175 mRNA_176 mRNA_177 mRNA_178
8542 8543 8544 8545 8546
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.3 -0.5 -0.5 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 -0.7 -0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.1 -0.9 -0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.5 +0.1 -0.9 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.7 -0.5 +0.2 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.1 +0.2 -0.6 N.D.
growth on oleic acid YNB Oleic Acid -0.3 -0.3 -0.0 +0.0 N.D.
growth on oleic acid YNB Glucose +0.1 -0.2 -0.3 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 +0.0 +0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.1 -0.3 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2 -0.2 +0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.2 -0.1 -0.2 -0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.4 +0.1 +0.0 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 +0.0 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.4 +0.4 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.0 +0.0 -0.1 N.D.
growth on ypd YPD -0.5 +0.6 +0.3 +0.6 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 +0.4 +1.3 N.D.
auxotrophy Dropout Complete +0.1 -0.2 +0.3 +1.5 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.3 +0.3 +1.5 N.D.
auxotrophy YNB Glucose +0.4 -0.1 +0.6 +1.4 N.D.
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