Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8543 and 8544 are separated by 675 nucleotides8544 and 8545 are separated by 171 nucleotides8545 and 8546 are separated by 383 nucleotides8546 and 8547 are separated by 144 nucleotides mRNA_175: 8543 - KOG2533 Permease of the major facilitator superfamily, at 429,470 to 431,854 8543 mRNA_176: 8544 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 432,530 to 433,945 8544 mRNA_177: 8545 - KOG4096 Uncharacterized conserved protein, at 434,117 to 434,779 8545 mRNA_178: 8546 - K00974 cca tRNA nucleotidyltransferase (CCA-adding enzyme), at 435,163 to 437,748 8546 mRNA_179: 8547 - KOG2886 Uncharacterized conserved protein, at 437,893 to 438,740 8547
Group Condition mRNA_175 mRNA_176 mRNA_177 mRNA_178 mRNA_179
8543 8544 8545 8546 8547
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.1 -0.9 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.9 -0.5 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.5 -0.5 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.7 -0.4 N.D. +0.0
growth on ricinoleic acid YNB Glucose -0.1 -0.2 -0.4 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.2 +0.1 N.D. -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.3 -0.2 N.D. +0.0
growth on oleic acid YNB Glucose -0.2 -0.3 -0.1 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.2 -0.6 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.0 +0.0 N.D. -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.5 +0.2 -0.2 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 +0.1 N.D. -0.3
growth on oleic acid YNB Oleic Acid -0.3 -0.0 +0.0 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.0 +0.0 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.0 -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.4 +0.2 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.4 +1.3 N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.3 +1.5 N.D. -0.1
auxotrophy Dropout Complete -0.2 +0.3 +1.5 N.D. -0.1
auxotrophy YNB Glucose -0.1 +0.6 +1.4 N.D. +0.2
growth on ypd YPD +0.6 +0.3 +0.6 N.D. +1.3
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