Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8545 and 8546 are separated by 383 nucleotides8546 and 8547 are separated by 144 nucleotides8547 and 8548 are separated by 202 nucleotides8548 and 8549 are separated by 595 nucleotides mRNA_177: 8545 - KOG4096 Uncharacterized conserved protein, at 434,117 to 434,779 8545 mRNA_178: 8546 - K00974 cca tRNA nucleotidyltransferase (CCA-adding enzyme), at 435,163 to 437,748 8546 mRNA_179: 8547 - KOG2886 Uncharacterized conserved protein, at 437,893 to 438,740 8547 mRNA_180: 8548 - K01647 CS, gltA citrate synthase, at 438,943 to 441,127 8548 mRNA_181: 8549 - K12870 ISY1 pre-mRNA-splicing factor ISY1, at 441,723 to 442,875 8549
Group Condition mRNA_177 mRNA_178 mRNA_179 mRNA_180 mRNA_181
8545 8546 8547 8548 8549
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 N.D. -0.1 -0.7 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 N.D. +0.1 -0.8 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.4 N.D. +0.0 -0.8 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. -0.6 -0.6 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 N.D. -0.1 -0.5 N.D.
growth on ricinoleic acid YNB Glucose -0.4 N.D. -0.3 -0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. +0.0 -0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. +0.2 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. +0.1 -0.4 N.D.
growth on oleic acid YNB Glucose -0.1 N.D. +0.1 -0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 N.D. +0.1 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. -0.4 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. -0.3 +0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.0 N.D. +0.1 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. +0.1 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. +0.2 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +1.5 N.D. -0.1 -0.6 N.D.
auxotrophy YNB Glucose 75mM Arginine +1.3 N.D. -0.0 -0.3 N.D.
auxotrophy Dropout Complete +1.5 N.D. -0.1 -0.3 N.D.
auxotrophy YNB Glucose +1.4 N.D. +0.2 -0.3 N.D.
growth on ypd YPD +0.6 N.D. +1.3 -0.2 N.D.
remove
mRNA_177
plot
remove
mRNA_178
plot
remove
mRNA_179
remove
mRNA_180
plot
remove
mRNA_181
plot