Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8553 and 8554 are separated by 387 nucleotides8554 and 8555 are separated by 536 nucleotides8555 and 8556 are separated by 135 nucleotides8556 and 8557 are separated by 644 nucleotides mRNA_185: 8553 - K11874 UBP16 ubiquitin carboxyl-terminal hydrolase 16, at 449,151 to 451,288 8553 mRNA_186: 8554 - Hypothetical Protein, at 451,676 to 453,998 8554 mRNA_187: 8555 - Hypothetical Protein, at 454,535 to 455,556 8555 mRNA_188: 8556 - K14536 RIA1 ribosome assembly protein 1, at 455,692 to 459,820 8556 mRNA_189: 8557 - Hypothetical Protein, at 460,465 to 463,611 8557
Group Condition mRNA_185 mRNA_186 mRNA_187 mRNA_188 mRNA_189
8553 8554 8555 8556 8557
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.4 +0.1 N.D. -0.4
growth on ricinoleic acid YNB Glucose -0.2 -0.3 +0.2 N.D. -0.3
growth on ypd YPD -0.0 +0.1 -0.1 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.2 +0.1 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 +0.4 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.2 +0.6 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.1 +0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 +0.3 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.1 +0.3 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 +0.3 N.D. -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.3 +0.4 N.D. +0.2
growth on oleic acid YNB Glucose +0.3 +0.3 -0.1 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.3 +0.3 N.D. -0.1
growth on oleic acid YNB Oleic Acid +0.2 +0.3 -0.2 N.D. +0.0
auxotrophy Dropout Complete +0.2 -0.3 +0.4 N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.3 +0.0 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.3 +0.3 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.0 +0.5 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.2 +0.4 N.D. +0.1
auxotrophy YNB Glucose +0.2 -0.4 +0.7 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.5 +0.5 +0.2 N.D. +0.1
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