Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8554 and 8555 are separated by 536 nucleotides8555 and 8556 are separated by 135 nucleotides8556 and 8557 are separated by 644 nucleotides8557 and 8558 are separated by 125 nucleotides mRNA_186: 8554 - Hypothetical Protein, at 451,676 to 453,998 8554 mRNA_187: 8555 - Hypothetical Protein, at 454,535 to 455,556 8555 mRNA_188: 8556 - K14536 RIA1 ribosome assembly protein 1, at 455,692 to 459,820 8556 mRNA_189: 8557 - Hypothetical Protein, at 460,465 to 463,611 8557 mRNA_190: 8558 - K09526 DNAJC6 DnaJ homolog subfamily C member 6, at 463,737 to 466,686 8558
Group Condition mRNA_186 mRNA_187 mRNA_188 mRNA_189 mRNA_190
8554 8555 8556 8557 8558
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.1 N.D. -0.4 N.D.
growth on ypd YPD +0.1 -0.1 N.D. -0.3 N.D.
growth on ricinoleic acid YNB Glucose -0.3 +0.2 N.D. -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.3 N.D. -0.1 N.D.
growth on oleic acid YNB Glucose +0.3 -0.1 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.4 N.D. -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.1 N.D. +0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.3 N.D. -0.1 N.D.
auxotrophy Dropout Complete -0.3 +0.4 N.D. +0.0 N.D.
growth on oleic acid YNB Oleic Acid +0.3 -0.2 N.D. +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.3 N.D. -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.3 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.4 N.D. +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.6 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 N.D. -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.0 N.D. -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.5 N.D. -0.1 N.D.
auxotrophy YNB Glucose -0.4 +0.7 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.3 N.D. +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.4 N.D. +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.5 +0.2 N.D. +0.1 N.D.
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