Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8558 and 8559 are separated by 105 nucleotides8559 and 8560 are separated by 221 nucleotides8560 and 8561 are separated by 354 nucleotides8561 and 8562 are separated by 1018 nucleotides mRNA_190: 8558 - K09526 DNAJC6 DnaJ homolog subfamily C member 6, at 463,737 to 466,686 8558 mRNA_191: 8559 - K18588 COQ10 coenzyme Q-binding protein COQ10, at 466,792 to 467,615 8559 mRNA_192: 8560 - HMMPfam-SUR7/PalI family-PF06687, at 467,837 to 468,649 8560 mRNA_193: 8561 - K14573 NOP4, RBM28 nucleolar protein 4, at 469,004 to 472,832 8561 mRNA_194: 8562 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 473,851 to 475,704 8562
Group Condition mRNA_190 mRNA_191 mRNA_192 mRNA_193 mRNA_194
8558 8559 8560 8561 8562
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.2 N.D. -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.2 N.D. -0.7
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.0 N.D. -0.5
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.1 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.0 N.D. -0.3
growth on oleic acid YNB Glucose N.D. N.D. -0.1 N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.2 N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.1 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.3 N.D. -0.4
growth on ypd YPD N.D. N.D. +0.2 N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.1 N.D. -0.1
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.2 N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.1 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.0 N.D. +0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.3 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.8 N.D. +0.0
auxotrophy Dropout Complete N.D. N.D. +0.6 N.D. +0.4
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +1.1 N.D. +0.0
auxotrophy YNB Glucose N.D. N.D. +0.8 N.D. +0.4
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