Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8561 and 8562 are separated by 1018 nucleotides8562 and 8563 are separated by 177 nucleotides8563 and 8564 are separated by 160 nucleotides8564 and 8565 are separated by 250 nucleotides mRNA_193: 8561 - K14573 NOP4, RBM28 nucleolar protein 4, at 469,004 to 472,832 8561 mRNA_194: 8562 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 473,851 to 475,704 8562 mRNA_195: 8563 - K14570 REX1, REXO1, RNH70 RNA exonuclease 1, at 475,882 to 478,455 8563 mRNA_196: 8564 - K11230 SSK2 mitogen-activated protein kinase kinase kinase, at 478,616 to 483,273 8564 mRNA_197: 8565 - K14765 NGDN, LCP5 U3 small nucleolar ribonucleoprotein protein LCP5, at 483,524 to 484,817 8565
Group Condition mRNA_193 mRNA_194 mRNA_195 mRNA_196 mRNA_197
8561 8562 8563 8564 8565
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.7 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.5 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.4 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.4 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.3 N.D. N.D. N.D.
growth on ypd YPD N.D. -0.3 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.2 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.2 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 N.D. N.D. N.D.
growth on oleic acid YNB Glucose N.D. -0.0 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.0 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.1 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.2 N.D. N.D. N.D.
auxotrophy YNB Glucose N.D. +0.4 N.D. N.D. N.D.
auxotrophy Dropout Complete N.D. +0.4 N.D. N.D. N.D.
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