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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8566 and 8567 are separated by 437 nucleotides
8567 and 8568 are separated by 803 nucleotides
8568 and 8569 are separated by 622 nucleotides
8569 and 8570 are separated by 919 nucleotides
mRNA_198: 8566 - K02952 RP-S13, rpsM small subunit ribosomal protein S13, at 485,103 to 485,929
8566
mRNA_199: 8567 - Hypothetical Protein, at 486,367 to 488,620
8567
mRNA_200: 8568 - K15541 MPE1 protein MPE1, at 489,424 to 492,149
8568
mRNA_201: 8569 - K00294 E1.2.1.88 1-pyrroline-5-carboxylate dehydrogenase, at 492,772 to 495,021
8569
mRNA_202: 8570 - HMMPfam-Frequency clock protein-PF09421, at 495,941 to 499,437
8570
Group
Condition
mRNA
_198
mRNA
_199
mRNA
_200
mRNA
_201
mRNA
_202
8566
8567
8568
8569
8570
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.1
N.D.
-0.8
-0.7
auxotrophy
Dropout Complete
N.D.
-0.0
N.D.
-1.2
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.1
N.D.
-1.2
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.0
N.D.
-0.6
-0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.2
N.D.
-0.6
-0.1
auxotrophy
YNB Glucose
N.D.
-0.1
N.D.
-0.7
-0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.1
N.D.
-0.5
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.3
N.D.
-0.5
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
N.D.
-0.7
+0.1
growth on oleic acid
YNB Glucose
N.D.
-0.1
N.D.
-0.6
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.0
N.D.
-0.2
-0.3
growth on ricinoleic acid
YNB Glucose
N.D.
-0.0
N.D.
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.1
N.D.
-0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.2
N.D.
-0.7
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.2
N.D.
+0.2
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
N.D.
+0.0
+0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
N.D.
-0.2
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
N.D.
+0.5
-0.4
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
N.D.
+0.4
+0.1
growth on ypd
YPD
N.D.
+0.0
N.D.
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
N.D.
+0.3
+0.0
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