Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8569 and 8570 are separated by 919 nucleotides8570 and 8571 are separated by 326 nucleotides8571 and 8572 are separated by 17 nucleotides8572 and 8573 are separated by 200 nucleotides mRNA_201: 8569 - K00294 E1.2.1.88 1-pyrroline-5-carboxylate dehydrogenase, at 492,772 to 495,021 8569 mRNA_202: 8570 - HMMPfam-Frequency clock protein-PF09421, at 495,941 to 499,437 8570 mRNA_203: 8571 - SUPERFAMILY--SSF51197, at 499,764 to 500,298 8571 mRNA_204: 8572 - Hypothetical Protein, at 500,316 to 500,871 8572 mRNA_205: 8573 - KOG4267 Predicted membrane protein, at 501,072 to 501,667 8573
Group Condition mRNA_201 mRNA_202 mRNA_203 mRNA_204 mRNA_205
8569 8570 8571 8572 8573
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.4 -0.8 -0.1 -2.7
growth on ricinoleic acid YNB Methylricinoleic Acid -1.2 +0.1 +0.1 -0.2 -0.3
auxotrophy Dropout Complete -1.2 +0.0 +0.3 -0.2 -0.0
growth on ricinoleic acid YNB Glucose -0.3 -0.1 -0.1 -0.2 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.1 -0.3 -0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.3 -0.1 -0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.3 +0.6 +0.0 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.0 -0.2 -0.2 +0.0
growth on oleic acid YNB Oleic Acid -0.7 +0.1 +0.2 +0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.8 -0.7 +0.6 +0.3 +0.4
auxotrophy YNB Glucose 75mM Methionine -0.6 -0.1 +0.3 -0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 -0.2 -0.1 +0.4
auxotrophy YNB Glucose -0.7 -0.0 +0.6 +0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.0 +0.5 +0.0 +0.2
growth on oleic acid YNB Glucose -0.6 +0.1 +0.4 -0.0 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.4 +0.1 -0.1 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 +0.4 -0.1 -0.2 +1.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.0 +0.3 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.0 +0.1 +0.0 +0.8
growth on ypd YPD +0.1 +0.4 +0.4 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.1 -0.2 -0.1 +1.1
remove
mRNA_201
plot
remove
mRNA_202
plot
remove
mRNA_203
remove
mRNA_204
plot
remove
mRNA_205
plot