Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8569 and 8570 are separated by 919 nucleotides
8570 and 8571 are separated by 326 nucleotides
8571 and 8572 are separated by 17 nucleotides
8572 and 8573 are separated by 200 nucleotides
mRNA_201: 8569 - K00294 E1.2.1.88 1-pyrroline-5-carboxylate dehydrogenase, at 492,772 to 495,021
8569
mRNA_202: 8570 - HMMPfam-Frequency clock protein-PF09421, at 495,941 to 499,437
8570
mRNA_203: 8571 - SUPERFAMILY--SSF51197, at 499,764 to 500,298
8571
mRNA_204: 8572 - Hypothetical Protein, at 500,316 to 500,871
8572
mRNA_205: 8573 - KOG4267 Predicted membrane protein, at 501,072 to 501,667
8573
Group
Condition
mRNA
_201
mRNA
_202
mRNA
_203
mRNA
_204
mRNA
_205
8569
8570
8571
8572
8573
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
-0.4
-0.8
-0.1
-2.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.2
+0.1
+0.1
-0.2
-0.3
auxotrophy
Dropout Complete
-1.2
+0.0
+0.3
-0.2
-0.0
growth on ricinoleic acid
YNB Glucose
-0.3
-0.1
-0.1
-0.2
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
+0.1
-0.3
-0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.3
-0.1
-0.2
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
-0.3
+0.6
+0.0
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.0
-0.2
-0.2
+0.0
growth on oleic acid
YNB Oleic Acid
-0.7
+0.1
+0.2
+0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
-0.7
+0.6
+0.3
+0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.6
-0.1
+0.3
-0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.1
-0.2
-0.1
+0.4
auxotrophy
YNB Glucose
-0.7
-0.0
+0.6
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.5
-0.0
+0.5
+0.0
+0.2
growth on oleic acid
YNB Glucose
-0.6
+0.1
+0.4
-0.0
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.4
+0.1
-0.1
+0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.7
+0.4
-0.1
-0.2
+1.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.0
+0.3
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.0
+0.1
+0.0
+0.8
growth on ypd
YPD
+0.1
+0.4
+0.4
+0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.4
+0.1
-0.2
-0.1
+1.1
remove
mRNA_201
plot
remove
mRNA_202
plot
remove
mRNA_203
remove
mRNA_204
plot
remove
mRNA_205
plot