Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8573 and 8574 are separated by 1422 nucleotides8574 and 8575 are separated by 1962 nucleotides8575 and 8576 are separated by 405 nucleotides8576 and 8577 are separated by 79 nucleotides mRNA_205: 8573 - KOG4267 Predicted membrane protein, at 501,072 to 501,667 8573 mRNA_206: 8574 - KOG0603 Ribosomal protein S6 kinase, at 503,090 to 504,560 8574 mRNA_207: 8575 - K01892 HARS, hisS histidyl-tRNA synthetase, at 506,523 to 508,733 8575 mRNA_208: 8576 - K19270 yfbT, yniC sugar-phosphatase, at 509,139 to 510,075 8576 mRNA_209: 8577 - K12571 PAN2 PAB-dependent poly(A)-specific ribonuclease subunit 2, at 510,155 to 514,679 8577
Group Condition mRNA_205 mRNA_206 mRNA_207 mRNA_208 mRNA_209
8573 8574 8575 8576 8577
ypd buoyancy 40 hrs No Buoyancy Separation -2.7 +0.1 N.D. +0.7 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.0 N.D. -0.6 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.7 N.D. -0.5 -0.2
growth on ricinoleic acid YNB Glucose -0.3 -0.4 N.D. -0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.1 N.D. -0.8 +0.6
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.0 N.D. +0.2 -0.4
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 N.D. -0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.3 N.D. +0.0 -0.0
growth on ypd YPD -0.1 +0.0 N.D. +0.2 +0.1
auxotrophy Dropout Complete -0.0 -0.1 N.D. -0.1 +0.5
ypd buoyancy 40 hrs High Buoyancy +1.1 -0.0 N.D. -0.4 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.0 N.D. -0.2 +0.4
auxotrophy YNB Glucose +0.2 +0.1 N.D. +0.1 +0.1
growth on oleic acid YNB Oleic Acid -0.0 -0.3 N.D. -0.3 +1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.2 N.D. +0.6 +0.1
growth on oleic acid YNB Glucose +0.4 -0.0 N.D. -0.1 +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 N.D. +0.6 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.4 N.D. +0.1 +1.8
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.8 -0.2 N.D. +0.2 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid +1.1 -0.5 N.D. +0.0 +0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 +0.1 N.D. +0.8 +0.3
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