Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8573 and 8574 are separated by 1422 nucleotides
8574 and 8575 are separated by 1962 nucleotides
8575 and 8576 are separated by 405 nucleotides
8576 and 8577 are separated by 79 nucleotides
mRNA_205: 8573 - KOG4267 Predicted membrane protein, at 501,072 to 501,667
8573
mRNA_206: 8574 - KOG0603 Ribosomal protein S6 kinase, at 503,090 to 504,560
8574
mRNA_207: 8575 - K01892 HARS, hisS histidyl-tRNA synthetase, at 506,523 to 508,733
8575
mRNA_208: 8576 - K19270 yfbT, yniC sugar-phosphatase, at 509,139 to 510,075
8576
mRNA_209: 8577 - K12571 PAN2 PAB-dependent poly(A)-specific ribonuclease subunit 2, at 510,155 to 514,679
8577
Group
Condition
mRNA
_205
mRNA
_206
mRNA
_207
mRNA
_208
mRNA
_209
8573
8574
8575
8576
8577
ypd buoyancy
40 hrs No Buoyancy Separation
-2.7
+0.1
N.D.
+0.7
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.0
N.D.
-0.6
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
-0.7
N.D.
-0.5
-0.2
growth on ricinoleic acid
YNB Glucose
-0.3
-0.4
N.D.
-0.2
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.1
N.D.
-0.8
+0.6
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.0
N.D.
+0.2
-0.4
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.1
N.D.
-0.2
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.4
-0.3
N.D.
+0.0
-0.0
growth on ypd
YPD
-0.1
+0.0
N.D.
+0.2
+0.1
auxotrophy
Dropout Complete
-0.0
-0.1
N.D.
-0.1
+0.5
ypd buoyancy
40 hrs High Buoyancy
+1.1
-0.0
N.D.
-0.4
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.0
N.D.
-0.2
+0.4
auxotrophy
YNB Glucose
+0.2
+0.1
N.D.
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
-0.0
-0.3
N.D.
-0.3
+1.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.2
N.D.
+0.6
+0.1
growth on oleic acid
YNB Glucose
+0.4
-0.0
N.D.
-0.1
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.1
N.D.
+0.6
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.4
N.D.
+0.1
+1.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.8
-0.2
N.D.
+0.2
+0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
+1.1
-0.5
N.D.
+0.0
+0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.6
+0.1
N.D.
+0.8
+0.3
remove
mRNA_205
plot
remove
mRNA_206
plot
remove
mRNA_207
remove
mRNA_208
plot
remove
mRNA_209
plot