Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8577 and 8578 are separated by 436 nucleotides8578 and 8579 are separated by 357 nucleotides8579 and 8580 are separated by 645 nucleotides8580 and 8581 are separated by 136 nucleotides mRNA_209: 8577 - K12571 PAN2 PAB-dependent poly(A)-specific ribonuclease subunit 2, at 510,155 to 514,679 8577 mRNA_210: 8578 - K08675 PRSS15, PIM1 Lon-like ATP-dependent protease, at 515,116 to 519,191 8578 mRNA_211: 8579 - K00432 gpx glutathione peroxidase, at 519,549 to 520,466 8579 mRNA_212: 8580 - K01194 TREH, treA, treF alpha,alpha-trehalase, at 521,112 to 523,919 8580 mRNA_213: 8581 - KOG1362 Choline transporter-like protein, at 524,056 to 525,912 8581
Group Condition mRNA_209 mRNA_210 mRNA_211 mRNA_212 mRNA_213
8577 8578 8579 8580 8581
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. N.D. -0.5 -0.6
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. N.D. -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.4 N.D. N.D. +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. N.D. -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. N.D. -0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. N.D. -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. N.D. -0.2 -0.3
growth on ricinoleic acid YNB Glucose +0.2 N.D. N.D. +0.0 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. N.D. +0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 N.D. N.D. -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. N.D. +0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. N.D. +0.0 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. N.D. +0.1 +0.1
auxotrophy Dropout Complete +0.5 N.D. N.D. -0.0 +0.0
auxotrophy YNB Glucose +0.1 N.D. N.D. +0.1 +0.3
growth on ypd YPD +0.1 N.D. N.D. +0.2 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 N.D. N.D. -0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 N.D. N.D. +0.0 -0.1
growth on oleic acid YNB Glucose +0.6 N.D. N.D. -0.1 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +1.8 N.D. N.D. -0.1 -0.3
growth on oleic acid YNB Oleic Acid +1.1 N.D. N.D. -0.0 +0.5
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