Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8578 and 8579 are separated by 357 nucleotides8579 and 8580 are separated by 645 nucleotides8580 and 8581 are separated by 136 nucleotides8581 and 8582 are separated by 2079 nucleotides mRNA_210: 8578 - K08675 PRSS15, PIM1 Lon-like ATP-dependent protease, at 515,116 to 519,191 8578 mRNA_211: 8579 - K00432 gpx glutathione peroxidase, at 519,549 to 520,466 8579 mRNA_212: 8580 - K01194 TREH, treA, treF alpha,alpha-trehalase, at 521,112 to 523,919 8580 mRNA_213: 8581 - KOG1362 Choline transporter-like protein, at 524,056 to 525,912 8581 mRNA_214: 8582 - Hypothetical Protein, at 527,992 to 533,023 8582
Group Condition mRNA_210 mRNA_211 mRNA_212 mRNA_213 mRNA_214
8578 8579 8580 8581 8582
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.5 -0.6 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.1 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.1 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.1 -0.4 +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.2 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.0 -0.1 -0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.0 -0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.1 -0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.2 -0.3 +0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.0 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.1 +0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.0 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.0 -0.2 +0.2
auxotrophy Dropout Complete N.D. N.D. -0.0 +0.0 +0.1
growth on oleic acid YNB Glucose N.D. N.D. -0.1 +0.4 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.2 +0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.1 +0.1 +0.1
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.0 +0.5 -0.1
growth on ypd YPD N.D. N.D. +0.2 +0.3 -0.1
auxotrophy YNB Glucose N.D. N.D. +0.1 +0.3 +0.2
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