Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8593 and 8594 are separated by 83 nucleotides8594 and 8595 are separated by 246 nucleotides8595 and 8596 are separated by 651 nucleotides8596 and 8597 are separated by 168 nucleotides mRNA_225: 8593 - KOG0619 FOG Leucine rich repeat, at 556,962 to 559,070 8593 mRNA_226: 8594 - KOG2861 Uncharacterized conserved protein, at 559,154 to 560,792 8594 mRNA_227: 8595 - K03259 EIF4E translation initiation factor 4E, at 561,039 to 562,506 8595 mRNA_228: 8596 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 563,158 to 565,625 8596 mRNA_229: 8597 - Hypothetical Protein, at 565,794 to 566,303 8597
Group Condition mRNA_225 mRNA_226 mRNA_227 mRNA_228 mRNA_229
8593 8594 8595 8596 8597
growth on ricinoleic acid YNB Glucose -0.3 +0.5 +0.2 -0.2 -1.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -0.0 -0.5 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.2 -1.2 -0.2 +0.9
growth on ypd YPD +0.2 -0.1 -0.4 -0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.1 +0.2 -0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.2 +0.3 -0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.1 -0.4 +0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.2 -0.0 +0.2 -0.3
auxotrophy Dropout Complete -0.3 +0.6 +0.3 -0.1 -0.6
auxotrophy YNB Glucose -0.1 +0.3 +0.5 -0.1 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.5 +0.3 -0.6 +0.4 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.6 +0.7 -0.1 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.2 +1.1 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.1 +0.2 -0.1 +1.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 +0.3 -0.4 -0.1 +0.5
ypd buoyancy 40 hrs High Buoyancy +0.5 +0.3 +0.3 +0.3 -0.2
growth on oleic acid YNB Glucose -0.1 +0.0 +0.1 +0.0 +1.1
growth on oleic acid YNB Oleic Acid -0.3 +0.0 +1.3 -0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.6 -0.1 +0.4 +0.0 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.3 +0.6 +0.0 +1.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.1 +0.9 +0.0 +1.5
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