Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8601 and 8602 are separated by 79 nucleotides8602 and 8603 are separated by 544 nucleotides8603 and 8604 are separated by 255 nucleotides8604 and 8605 are separated by 53 nucleotides mRNA_233: 8601 - K06287 maf septum formation protein, at 575,956 to 577,138 8601 mRNA_234: 8602 - K00452 HAAO 3-hydroxyanthranilate 3,4-dioxygenase, at 577,218 to 578,179 8602 mRNA_235: 8603 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 578,724 to 580,674 8603 mRNA_236: 8604 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 580,930 to 582,126 8604 mRNA_237: 8605 - K08098 PIGZ, SMP3 phosphatidylinositol glycan, class Z, at 582,180 to 584,217 8605
Group Condition mRNA_233 mRNA_234 mRNA_235 mRNA_236 mRNA_237
8601 8602 8603 8604 8605
ypd buoyancy 40 hrs No Buoyancy Separation -2.8 -1.3 +1.2 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -2.3 +0.1 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -1.3 -0.0 -0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -1.1 +0.1 -0.6 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -1.6 -0.1 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -1.1 +0.2 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.3 -0.5 -0.2 N.D.
growth on ricinoleic acid YNB Glucose -0.9 -0.1 +0.1 -0.1 N.D.
auxotrophy YNB Glucose -0.3 -0.5 -0.2 +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -1.0 +0.6 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.7 -0.5 -0.0 +0.3 N.D.
auxotrophy Dropout Complete +0.3 -1.2 +0.1 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.5 +0.2 +0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.8 -0.1 +0.5 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.3 +0.5 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.4 +0.7 +0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.2 -0.6 +0.3 +0.1 N.D.
growth on oleic acid YNB Glucose +0.1 +0.0 +0.1 +0.0 N.D.
growth on ypd YPD +0.2 +0.2 -0.7 +0.9 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 +0.9 +0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.8 -0.3 +0.3 +0.2 N.D.
remove
mRNA_233
plot
remove
mRNA_234
plot
remove
mRNA_235
remove
mRNA_236
plot
remove
mRNA_237
plot