Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8602 and 8603 are separated by 544 nucleotides8603 and 8604 are separated by 255 nucleotides8604 and 8605 are separated by 53 nucleotides8605 and 8606 are separated by 1021 nucleotides mRNA_234: 8602 - K00452 HAAO 3-hydroxyanthranilate 3,4-dioxygenase, at 577,218 to 578,179 8602 mRNA_235: 8603 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 578,724 to 580,674 8603 mRNA_236: 8604 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 580,930 to 582,126 8604 mRNA_237: 8605 - K08098 PIGZ, SMP3 phosphatidylinositol glycan, class Z, at 582,180 to 584,217 8605 mRNA_238: 8606 - Hypothetical Protein, at 585,239 to 585,472 8606
Group Condition mRNA_234 mRNA_235 mRNA_236 mRNA_237 mRNA_238
8602 8603 8604 8605 8606
buoyancy on lipid accumulation 40 hrs Median Buoyancy -2.3 +0.1 +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.6 -0.1 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.3 -0.0 -0.3 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 +0.1 -0.6 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -1.1 +0.2 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.5 -0.2 N.D. N.D.
auxotrophy Dropout Complete -1.2 +0.1 +0.1 N.D. N.D.
auxotrophy YNB Glucose -0.5 -0.2 +0.0 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -1.0 +0.6 -0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.5 +0.2 +0.0 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.1 +0.1 -0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.0 +0.3 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.6 +0.3 +0.1 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 +1.2 +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.5 -0.1 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.3 +0.2 N.D. N.D.
growth on oleic acid YNB Glucose +0.0 +0.1 +0.0 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.7 +0.1 N.D. N.D.
growth on ypd YPD +0.2 -0.7 +0.9 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.5 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.9 +0.3 N.D. N.D.
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